TCONS_00052073-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00052073-protein
Unique NameTCONS_00052073-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length787

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00052073-protein ID=TCONS_00052073-protein|Name=TCONS_00052073-protein|organism=Clytia hemisphaerica|type=polypeptide|length=787bp
MASISESSSDKSYLNRLSQWDSRSTSLAPLSDKQRECVIELNTLTQRPIP
EKFRHRKRTSDSVSSLPEDDEISKHIASLDLGTRKIENAQQFFSWFSQVQ
VQMGEEQERNYREYRDDLQDYVDRCHTILSEVQKVLDNLTNLEKQHVFVS
TQTRALHDACEQSLHDQANLMEQAESIANSLSYFKAYESIKHKLTTSTLT
VTGESFIPLLKKIDDSILYIEAHPDYKESAVYLARFKACLNQALQLVKQY
VVNVMRNTASQSVEAMKIANQPSLNVNDSNYTALYGKFKTQAIRIKSIME
KLEEREKNSKEYEQLISDCQQCYLEYRWQIMSPFIHETIDKMSKQHTRNP
CTLFRSGCSFMLHICRDEYQLYHEFFTHGKLNFDTLMENVCGILYDTFRP
LIIQMTHMETLAELCNILKVEMLEDHIQKRAEQLSSFQVIVSEMLEDVQE
RLVYRTQTYISKDIAGYSPAPGDLAYPDKLMMELGTNDVSIDSDDKSAIS
RKGATAVVDLQAMWYPTVRRTLVCLSKLYNSIGKPTFEGIAQEALSCCIV
TLKYASNEITKKKGAINGHLFLIKHLLILREQISPFDVDFAIKEVSLDFT
KLRSAAYGLFAKGSQILSLNSNNALLEFLLEGVPQMTEYYIDSKQEVDAE
LKTVCERFISETTDSFIAPLNALLDKIDTILKMAEQEGKNGQQLLKQQPF
AKADAVRKIVSETYMLLKSKLPSTLQSLALYLANKDTEYILFKPVTAKVL
KTYKQLNTVVVKHYDHEDQQIIGCPSQEQVSLLMAFH
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_032981XLOC_032981Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00052073TCONS_00052073Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007265COG_su3
IPR029033His_PPase_superfam
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0005801cis-Golgi network
Vocabulary: Biological Process
TermDefinition
GO:0006886intracellular protein transport
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006886 intracellular protein transport
cellular_component GO:0005801 cis-Golgi network
cellular_component GO:0016020 membrane
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 104..124
NoneNo IPR availableCOILSCoilCoilcoord: 295..315
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 50..69
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..22
IPR007265Conserved oligomeric Golgi complex, subunit 3PFAMPF04136Sec34coord: 114..261
e-value: 1.3E-45
score: 154.8
IPR029033Histidine phosphatase superfamilyGENE3D3.40.50.1240coord: 15..431
e-value: 9.9E-5
score: 21.2

Blast
[Close]
BLAST of TCONS_00052073-protein vs. Swiss-Prot (Human)
Match: COG3 (Conserved oligomeric Golgi complex subunit 3 OS=Homo sapiens GN=COG3 PE=1 SV=3)

HSP 1 Score: 718.768 bits (1854), Expect = 0.000e+0
Identity = 362/811 (44.64%), Postives = 523/811 (64.49%), Query Frame = 0 
Query:   16 RLSQWDSRSTSLAPLSDKQRECVIELNTLTQR-PIPEKFRHRKRTSDSVSSLP----------EDDEISKHIASLDLGTRKIENAQQFFSWFSQVQVQMGEEQERNYREYRDDLQDYVDRCHTILSEVQKVLDNLTNLEKQHVFVSTQTRALHDACEQSLHDQANLMEQAESIANSLSYFKAYESIKHKLTTSTLTVTGESFIPLLKKIDDSILYIEAHPDYKESAVYLARFKACLNQALQLVKQYVVNVMRNTASQSVEAMKIANQPSLNVN-DSNYTALYGKFKTQAIRIKSIMEKLEEREKNSKEYEQLISDCQQCYLEYRWQIMSPFIHETIDKMSKQHTRNPCTLFRSGCSFMLHICRDEYQLYHEFFTHGKLNFDTLMENVCGILYDTFRPLIIQMTHMETLAELCNILKVEMLEDHIQKRAEQLSSFQVIVSEMLEDVQERLVYRTQTYISKDIAGYSPAPGDLAYPDKLMM-----------------ELGTNDVSIDSDDKSAISRKGAT-----------AVVDLQAMWYPTVRRTLVCLSKLYNSIGKPTFEGIAQEALSCCIVTLKYASNEITKKKGAINGHLFLIKHLLILREQISPFDVDFAIKEVSLDFTKLRSAAYGLFAKGS--QILSLNSNNALLEFLLEGVPQMTEYYIDSKQEVDAELKTVCERFISETTDSFIAPLNALLDKIDTILKMAEQEGKNGQQLLKQQPFAKADAVRKIVSETYMLLKSKLPSTLQSLALYLANKDTEYILFKPVTAKVLKTYKQLNTVVVKHYDHEDQQIIGCPSQEQVSLLM 784
            +L+ WD R  + APL+D+Q + V+EL    +  P+P +       S +  SLP           +D + K   SL +   +IE AQQFFSWF+++Q QM +++   YR+ RD L  + ++C  IL++V   L +L +L+KQ++FVS +T  LH+ACEQ L +Q+ L++ AE+I   LSYF   E+I  KL + TL+V  + FIP+L K+DD I YI +HP++K+  +YL +FK CL++AL L+K Y VN ++   SQ ++       PS   N D+ +T  Y KF+  A ++++++E++E R +   EY+QL++D  QCYL+ R  ++ P I  T+ +++ Q+ R+ C L RSGC+FM+H+C+DE+QLY+EFFT      D L+E +C  LYD FRPLII + H+ETL+ELC ILK E+LEDH+Q  AEQL +F   V +MLEDVQERLVYRT  YI  DI GY PAPGDLAYPDKL+M                 E   +DV ++  + +++++ G+T           +  DL  MWYPTVRRTLVCLSKLY  I +  F+G++QEALS CI +L  AS  I+K K  I+G LFLIKHLLILREQI+PF  +F IKE+SLD  K R AA+ +    +  +   LNSNNAL+EFLLEG P++ E+Y+DSK++VD  LK+ CE+FI + T  F+  L   + K+  +  MA Q G   +  L QQP+A+   V  + +  Y  +K+KLP TL+S++LYL+NKDTE+ILFKPV   + + +++ + ++ + +  ED QII CPS EQ+SLL+
Sbjct:   21 KLALWDRRPDTTAPLTDRQTDSVLELKAAAENLPVPAELPIEDLCSLTSQSLPIELTSVVPESTEDILLKGFTSLGMEEERIETAQQFFSWFAKLQTQMDQDEGTKYRQMRDYLSGFQEQCDAILNDVNSALQHLESLQKQYLFVSNKTGTLHEACEQLLKEQSELVDLAENIQQKLSYFNELETINTKLNSPTLSVNSDGFIPMLAKLDDCITYISSHPNFKDYPIYLLKFKQCLSKALHLMKTYTVNTLQTLTSQLLK-----RDPSSVPNADNAFTLFYVKFRAAAPKVRTLIEQIELRSEKIPEYQQLLNDIHQCYLDQRELLLGPSIACTVAELTSQNNRDHCALVRSGCAFMVHVCQDEHQLYNEFFTKPTSKLDELLEKLCVSLYDVFRPLIIHVIHLETLSELCGILKNEVLEDHVQNNAEQLGAFAAGVKQMLEDVQERLVYRTHIYIQTDITGYKPAPGDLAYPDKLVMMEQIAQSLKDEQKKVPSEASFSDVHLEEGESNSLTKSGSTESLNPRPQTTISPADLHGMWYPTVRRTLVCLSKLYRCIDRAVFQGLSQEALSACIQSLLGASESISKNKTQIDGQLFLIKHLLILREQIAPFHTEFTIKEISLDLKKTRDAAFKILNPMTVPRFFRLNSNNALIEFLLEGTPEIREHYLDSKKDVDRHLKSACEQFIQQQTKLFVEQLEEFMTKVSALKTMASQGGP--KYTLSQQPWAQPAKVNDLAATAYKTIKTKLPVTLRSMSLYLSNKDTEFILFKPVRNNIQQVFQKFHALLKEEFSPEDIQIIACPSMEQLSLLL 824
The following BLAST results are available for this feature:
BLAST of TCONS_00052073-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
COG30.000e+044.64Conserved oligomeric Golgi complex subunit 3 OS=Ho... [more]
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