TCONS_00051590-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00051590-protein
Unique NameTCONS_00051590-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length843

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00051590-protein ID=TCONS_00051590-protein|Name=TCONS_00051590-protein|organism=Clytia hemisphaerica|type=polypeptide|length=843bp
MRYGHTLVEYGGSLFLFGGTVYKNEDFAHPSISNDLLEYKTNTNSWESHT
SDAIPVTGHASVVIQGHIYSFFGYNEKYILFNRVQKLNLSQNKKTWTIVD
TKGALIKGRSGHTATYDSVSNTVFIFGGYASSAITEDNELLLFNVAEESW
SIGASAPSSRVLHAAGIVGNNFVIFGGNSNVRSHRVSSCFNNDLLVYSID
CNKWIQKSFPLLDEEKRYGHSAVIVNNSIHVFGGFNGQFLNDVFEIAIGD
DCGGYLLKGECLKADPLSGCVWHIQSKKCIRFQQNIPTSAIEKPECEGAS
INCNLYNTCTRCLGYTQCDWLKDECFERNPISPYKDPTTCPLYETAVCST
FSNCYSCHQQDNCTWTGNSCSNGSTKGLCFSNSNATSCSEFNGCSTCVES
ENCLWCESTQTCLPSNMYVANFPYGQCMEYIQDKASCSVAKCEQQYSCRN
CLQLPQCGWCESTNKCTTGGDEGPINGQCPKNDWMFTKCPKCDCNGHSKC
DNITGECLQCNENVIGDHCNECAHGYYGNPANNGSCSNKCECNGHLLSCD
VNGECVCSSQGVTGSHCDKCDVQYEGDPRNGGICYYPLLANYQYTSSMSS
KKQSGYVLKTKDKKPFKVKIERLKGNIGSLNITIVYANNETTELVSAYPL
GEYSTTITEDTYDYSGVASIYVVVYGWEQSSNGFAIKIFFDPDDNAFDLV
YFLIMFIVCFVSLLVILVILWKVKQRYDRYMYNRRQKQEMEERISRPFTS
MKILLRDKTDLPSKEKVKHPPSLIGIQLLRQANNCGPASFLVRLPCEQNT
QVTPAGQCGICIGTVLISQPSKRTKMQMQNSTRRKRTNKALPV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_032671XLOC_032671Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00051590TCONS_00051590Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002049Laminin_EGF
IPR016201PSI
IPR006652Kelch_1
IPR015915Kelch-typ_b-propeller
IPR002165Plexin_repeat
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002049Laminin EGF domainSMARTSM00180lamegf_3coord: 492..536
e-value: 1.5E-10
score: 51.1
coord: 540..584
e-value: 0.86
score: 12.3
IPR002049Laminin EGF domainPFAMPF00053Laminin_EGFcoord: 492..536
e-value: 4.4E-9
score: 36.2
coord: 540..581
e-value: 0.0051
score: 16.8
IPR002049Laminin EGF domainPROSITEPS01248EGF_LAM_1coord: 507..542
IPR002049Laminin EGF domainPROSITEPS50027EGF_LAM_2coord: 540..586
score: 10.921
IPR002049Laminin EGF domainPROSITEPS50027EGF_LAM_2coord: 492..538
score: 17.148
IPR016201PSI domainSMARTSM00423psinew7coord: 302..341
e-value: 2.3
score: 12.4
coord: 441..490
e-value: 2.4E-6
score: 37.1
coord: 251..297
e-value: 13.0
score: 4.6
coord: 387..438
e-value: 0.46
score: 19.5
NoneNo IPR availableGENE3D3.30.1680.10coord: 251..296
e-value: 0.016
score: 15.0
NoneNo IPR availableGENE3D2.10.25.10coord: 538..586
e-value: 4.5E-6
score: 26.4
NoneNo IPR availableGENE3D2.10.25.10coord: 493..537
e-value: 1.7E-10
score: 40.6
NoneNo IPR availablePFAMPF13418Kelch_4coord: 108..158
e-value: 2.6E-4
score: 20.8
NoneNo IPR availableGENE3D3.30.1680.10coord: 440..492
e-value: 7.3E-4
score: 19.3
coord: 386..438
e-value: 0.22
score: 11.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 822..843
NoneNo IPR availableCDDcd00055EGF_Lamcoord: 492..536
e-value: 2.61824E-10
score: 56.2086
NoneNo IPR availableCDDcd00055EGF_Lamcoord: 540..585
e-value: 6.59813E-5
score: 40.4154
NoneNo IPR availableSUPERFAMILY57196EGF/Laminincoord: 492..537
NoneNo IPR availableSUPERFAMILY117281Kelch motifcoord: 1..245
IPR006652Kelch repeat type 1PFAMPF01344Kelch_1coord: 217..244
e-value: 1.6E-4
score: 21.1
IPR015915Kelch-type beta propellerGENE3D2.120.10.80coord: 1..250
e-value: 1.6E-44
score: 151.6
IPR002165Plexin repeatPFAMPF01437PSIcoord: 441..490
e-value: 4.5E-5
score: 23.8

Blast
[Close]
BLAST of TCONS_00051590-protein vs. Swiss-Prot (Human)
Match: ATRN (Attractin OS=Homo sapiens GN=ATRN PE=1 SV=2)

HSP 1 Score: 234.958 bits (598), Expect = 3.326e-64
Identity = 160/506 (31.62%), Postives = 241/506 (47.63%), Query Frame = 0 
Query:  386 TSCSEFNGCSTCVE-SENCLWCESTQTCLPSNMYVANFPYGQCMEYIQDKASCSVAKCEQQYSCRNCLQLPQCGWCESTN-----KCTTGGDEGPIN--GQCP-------------------KNDWMFTKCPKCDCNGHSKCDNITGECLQCNENVIGDHCNECAHGYYGNPANNGSCSNKCECNGHLLSCDVN-GECVCSSQGVTGSHCDKCDVQ--YEGDPRNGGICYYPLLANYQYTSSMSSKKQSGYV----LKTKDKKPFKVKIERLKGNIGSLNITIVYANN--------ETTELVSAYPLGEYSTTITEDTYDYSGVASIYVVVYGWEQSSNGFAIKIFFDPDDNAFDLVYFLIMFIVCFVSLLVILVILWKVKQRYDRYMYNRRQK--QEMEERISRPFTSMKILLRDKTDLPS--KEKVKHPPSLIGIQLLRQANNCGPASFLVRLPCEQNTQVTPAGQCGICIGTVL--ISQPSKRTKMQMQNSTR-RKRTNKALP 842
            T C+    C  C   S  C+WC + + C+ SN YVA+FP+GQCME+    ++C    C    +C +CL+ P CGWC   +     KC  G  +GP+    Q P                   + +W F  CP C CNGHSKC N +  C +C     G HC  C  G+YG+P N G C   C+CNGH   C+ N G+C C+++GV G  C  C+V+  Y+G+P   G CYY LL +YQ+T S+S +    Y     + T D++     ++       + N+ I +A +        E   +VS   + EY  + + + +D+    +I   VY     +    I+I F    N  DLV F + F  CF+SLL++  ++WK+KQ    +   RR++  +EM++  SRPF S+ + L    + P      +K  P  I ++     N     S  VRLP      + P GQ G+ + + L  ISQ       +   + R RK+   A P
Sbjct:  931 TPCALRTACGDCTSGSSECMWCSNMKQCVDSNAYVASFPFGQCMEWYT-MSTCPPENCSGYCTCSHCLEQPGCGWCTDPSNTGKGKCIEGSYKGPVKMPSQAPTGNFYPQPLLNSSMCLEDSRYNWSFIHCPACQCNGHSKCINQS-ICEKCENLTTGKHCETCISGFYGDPTNGGKC-QPCKCNGHASLCNTNTGKCFCTTKGVKGDECQLCEVENRYQGNPLR-GTCYYTLLIDYQFTFSLSQEDDRYYTAINFVATPDEQ--NRDLDMFINASKNFNLNITWAASFSAGTQAGEEMPVVSKTNIKEYKDSFSNEKFDFRNHPNITFFVYV-SNFTWPIKIQIAFSQHSNFMDLVQFFVTFFSCFLSLLLVAAVVWKIKQSC--WASRRREQLLREMQQMASRPFASVNVALETDEEPPDLIGGSIKTVPKPIALEPCF-GNKAAVLSVFVRLP-RGLGGIPPPGQSGLAVASALVDISQQMPIVYKEKSGAVRNRKQQPPAQP 1425

HSP 2 Score: 171.785 bits (434), Expect = 9.365e-44
Identity = 116/396 (29.29%), Postives = 195/396 (49.24%), Query Frame = 0 
Query:    1 MRYGHTLVEYGGSLFLFGGTVYKNEDFAHPSISNDLLEYKTNTNSWESHTSDA---IPVTGHASVVI---QGHIYSF--FGYNEKYILFNRVQKLNLSQNKKTWTIVDTKGALIKGRSGHTATYDSVSNTVFIFGGYASSAITE---DNELLLFNVAEESWSIGASAPSSRVLHAAGIVGNNFVIFGGNS--NVRSHRVSSCFNNDLLVYSIDCNKWIQKSFPLLDEE-KRYGHSAVIVNNSIHVFGGFNGQFLNDVFEIAIGDDCGGYLLKGECLKADPLSGCVWHIQSKKCIRFQQNIPTSAIE---KPECEGASI----NCNLYNTCTRCLGYT-QCDWLKDECFERN--------PISPYKD-PTTCPLYETAVCSTFSNCYSCHQQDNCTW 365
            +RYGH+L  Y   ++++GG +    +     ++N+L  +  +  SW   T  A     V GH++ ++    G +     FG+   Y   + VQ+ +L +N  TW+I+ T+GAL++G  GH++ YD  +  +++ GGY + +  +    ++L  ++V  + W+I   +   R LH A IV    ++FGGN+  +      + CF++D + Y I C++W     P L  +  R+GHSAV+ N++++VFGGFN   L+D+  +   + C  +  +  CL A P   CVW+  S +CI +   + T   E   K EC          C+ +  C  C   T  C W  D C  RN         I  Y++ P   P+Y    C+  ++C SC    NC W
Sbjct:  391 VRYGHSLALYKDKIYMYGGKIDSTGN-----VTNELRVFHIHNESWVLLTPKAKEQYAVVGHSAHIVTLKNGRVVMLVIFGHCPLYGYISNVQEYDLDKN--TWSILHTQGALVQGGYGHSSVYDHRTRALYVHGGYKAFSANKYRLADDLYRYDVDTQMWTILKDSRFFRYLHTAVIVSGTMLVFGGNTHNDTSMSHGAKCFSSDFMAYDIACDRWSVLPRPDLHHDVNRFGHSAVLHNSTMYVFGGFNSLLLSDIL-VFTSEQCDAHRSEAACLAAGPGIRCVWNTGSSQCISWA--LATDEQEEKLKSECFSKRTLDHDRCDQHTDCYSCTANTNDCHWCNDHCVPRNHSCSEGQISIFRYENCPKDNPMY---YCNKKTSCRSCALDQNCQW 773
The following BLAST results are available for this feature:
BLAST of TCONS_00051590-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ATRN3.326e-6431.62Attractin OS=Homo sapiens GN=ATRN PE=1 SV=2[more]
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