TCONS_00051382-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00051382-protein
Unique Name	TCONS_00051382-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	456

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00051382-protein ID=TCONS_00051382-protein|Name=TCONS_00051382-protein|organism=Clytia hemisphaerica|type=polypeptide|length=456bp
MMTTHVCNKNDSSKQRFGVVRIKPLGAGGGGVETSSATGKSIIDFSKDHV
SVRDRKKYSYPSMIIPPRMKQDELFDNFMPKCIDDFFQGYNVNVIAYGQT
GTGKTHTMFGPPGCMKRAARGEYSYETHQTYGLFPRGILEIFRKVHECNT
TESQSSSSNIYALTCSAVELCHMGNEDMFNKSEKRDYSFANGSGSLGIIL
NRDEKPPRLYGQNEYEIKTYDDILRVFAAIASRNTEGTLLNDTSSRSHCL
VALKLWRYDVSTKMVFKTRFQFCDLAGSEKLDKAHSDTSMKLPNGEWNHL
AIMGMSTNFSYTELQRCLNDIAIQKKQNRKFNFRAYVTDLLFLLSGSLVG
NAITALFVCVSQAESNKAESNYALDFGEKFSKLDMNCQKVKGRLLEDLQK
ELLKSIDDNCRQIDSASTWKNRYTMMRKAQVRDCEQILNVLKNFSEEKMG
SVKSMN

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_032560	XLOC_032560	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00051382	TCONS_00051382	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001752	Kinesin_motor_dom
IPR027417	P-loop_NTPase

Vocabulary: **Molecular Function**
Term	Definition
GO:0005524	ATP binding
GO:0003777	microtubule motor activity
GO:0008017	microtubule binding

Vocabulary: **Biological Process**
Term	Definition
GO:0007018	microtubule-based movement

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007018	microtubule-based movement
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0008017	microtubule binding
molecular_function	GO:0003777	microtubule motor activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001752	Kinesin motor domain	PRINTS	PR00380	KINESINHEAVY	coord: 269..287 score: 38.03 coord: 238..255 score: 44.68 coord: 89..110 score: 66.59
IPR001752	Kinesin motor domain	SMART	SM00129	kinesin_4	coord: 14..391 e-value: 1.5E-16 score: 32.8
IPR001752	Kinesin motor domain	PFAM	PF00225	Kinesin	coord: 45..381 e-value: 6.3E-45 score: 153.4
IPR001752	Kinesin motor domain	GENE3D	3.40.850.10		coord: 8..393 e-value: 3.7E-51 score: 173.3
IPR001752	Kinesin motor domain	PROSITE	PS50067	KINESIN_MOTOR_2	coord: 15..383 score: 34.206
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 19..386

Blast

[Close]

BLAST of TCONS_00051382-protein vs. Swiss-Prot (Human)
Match: KIFC3 (Kinesin-like protein KIFC3 OS=Homo sapiens GN=KIFC3 PE=1 SV=4)

HSP 1 Score: 110.538 bits (275), Expect = 8.856e-26
Identity = 103/375 (27.47%), Postives = 170/375 (45.33%), Query Frame = 0

Query:   19 VVRIKPLG-AGGGGVETSSATGKSIIDFSKDHVSVRDRKKYSYPSMIIPPRMKQDELFDN---FMPKCIDDFFQGYNVNVIAYGQTGTGKTHTMFGPPGCMKRAARGEYSYETHQTYGLFPRGILEIFRKVHECNTTESQSSSSNIYALTCSAVELCHMGNEDMFNKSEKRDYSF---ANGSGSLGIILNRDEKPPRLYGQNEYEIKTYDDILRVFA-AIASRNTEGTLLNDTSSRSHCLVALKLWRYDVSTKMVFKTRFQFCDLAGSEKLDKAHSDTSMKLPNGEWNHLAIMGMSTNFSYTELQRCLNDIAIQKKQNRKFNFRAYVTDLLFLLSGSLVGNAITALFVCVSQAESNKAESNYALDFGEKFSKLDM 385
            + R++P+    G G E ++A      D S  H+  + +        +  P+  Q ++F      +  CID    G+NV + AYGQTG GKT+TM G                T +  G+  R +  +F +V E        +S   Y +T SA E+ +    D+  K  +         +GSG L +            G  E+++++ DDI +VF     +R TE T LN+ SSRSH L+ + +   D ST +    +    DLAGSE++ K+ ++ S      E  H+       N S +     L D+ I   ++R+ +     + L +LL  SL G++ T + V VS  E N +E+ Y+L F E+   +++
Sbjct:  449 IARVRPVTKEDGEGPEATNAVTFDADDDSIIHLLHKGKPVSFELDKVFSPQASQQDVFQEVQALVTSCID----GFNVCIFAYGQTGAGKTYTMEG----------------TAENPGINQRALQLLFSEVQE-------KASDWEYTITVSAAEIYNEVLRDLLGKEPQEKLEIRLCPDGSGQLYV-----------PGLTEFQVQSVDDINKVFEFGHTNRTTEFTNLNEHSSRSHALLIVTVRGVDCSTGLRTTGKLNLVDLAGSERVGKSGAEGSRLR---EAQHI-------NKSLS----ALGDV-IAALRSRQGHVPFRNSKLTYLLQDSLSGDSKTLMVVQVSPVEKNTSETLYSLKFAERVRSVEL 770

The following BLAST results are available for this feature:

BLAST of TCONS_00051382-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00051382-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
KIFC3	8.856e-26	27.47	Kinesin-like protein KIFC3 OS=Homo sapiens GN=KIFC...	[more]

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TCONS_00051382-protein (polypeptide) - C. hemisphaerica