TCONS_00051232-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00051232-protein
Unique NameTCONS_00051232-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length569

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00051232-protein ID=TCONS_00051232-protein|Name=TCONS_00051232-protein|organism=Clytia hemisphaerica|type=polypeptide|length=569bp
MLQQIIKTMYIEPELLEELSEEQKQILYFKMREEQIRRYKVRMEEEEMEG
KLNPEPKKGLKKVSFLTNDEDEPIVHVIKDPDDEHVVDAVAVKKRIEAEA
LKLAELQAKKEHEEKRKKELETIEKKRKEEEKRLKDEEERLKKEREQKVA
ELKLQAEKAAALEAREATLQREKAELERIELERKRLEEEKQREQALQELR
EKEEVEKKQREEEQRIEEEKRKEEIYEKLKIQQEEERKKEEEEAEQLQQE
WEEREVKAKEADRQRRSSISQARNELSRQRRLAKEREELERSRVEAKVDE
KPEIYDPEANKTVFTQTTPPPDEKEKSKKDKKQSFSFGRKKKPSLEEKEN
KKKHSPTLLSASKTKSPERPPLPARPTISAPSGVTSTRTEKDAIPVKKDI
VKPKRPPPPPTGGGGDKKNTSKPPLPPRPKSHNEVVTWWKDNEYDKKAGL
DDDHKPLQWFHGTISRLQAEHLLEDQKQGSFLIRVSERVWGYTISYKDVA
RFKHFLIDTTSGYQLFGTEQKVHSSLNELIDYHKQHPISGLGQEILKFPV
GQNTDPPDYADLFVENTSI
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_032475XLOC_032475Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00051232TCONS_00051232Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000980SH2
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 89..264
NoneNo IPR availableCOILSCoilCoilcoord: 29..49
NoneNo IPR availableCOILSCoilCoilcoord: 269..299
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 197..433
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 108..147
IPR000980SH2 domainPRINTSPR00401SH2DOMAINcoord: 522..536
score: 28.56
coord: 459..473
score: 49.51
coord: 478..488
score: 55.05
IPR000980SH2 domainSMARTSM00252SH2_5coord: 457..539
e-value: 2.5E-23
score: 93.5
IPR000980SH2 domainGENE3D3.30.505.10coord: 440..567
e-value: 4.0E-24
score: 84.3
IPR000980SH2 domainPFAMPF00017SH2coord: 459..533
e-value: 2.4E-17
score: 62.7
IPR000980SH2 domainPROSITEPS50001SH2coord: 459..550
score: 18.487
IPR000980SH2 domainSUPERFAMILY55550SH2 domaincoord: 451..550

Blast
[Close]
BLAST of TCONS_00051232-protein vs. Swiss-Prot (Human)
Match: SH24B (SH2 domain-containing protein 4B OS=Homo sapiens GN=SH2D4B PE=2 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 3.810e-35
Identity = 62/140 (44.29%), Postives = 92/140 (65.71%), Query Frame = 0 
Query:  426 PPRPKSHNEVVTWWKDNEYDKKAGLDDDHKPLQ-WFHGTISRLQAEHLLEDQKQGSFLIRVSERVWGYTISYKDVARFKHFLIDTTSG-YQLFGTEQKVHSSLNELIDYHKQHPISGLGQEILKFPVGQNTDPPDYADLF 563
            P RP S + +V W+K+ +  ++AG + + K +  WFHG ISR  AE LLE+  +G+FL+RVSE++WGYT+SY+    FKHFL+D +   Y   G +   H++L +L+D+HK+  I+  G E+L+ P GQ   PPDY  LF
Sbjct:  291 PLRPVSRDVIVRWFKEEQLPRRAGFERNTKFIAPWFHGIISREDAEALLENMTEGAFLVRVSEKIWGYTLSYRLQKGFKHFLVDASGDFYSFLGVDPNRHATLTDLVDFHKEEIITVSGGELLQEPCGQRDSPPDYHLLF 430
The following BLAST results are available for this feature:
BLAST of TCONS_00051232-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SH24B3.810e-3544.29SH2 domain-containing protein 4B OS=Homo sapiens G... [more]
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