TCONS_00050900-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00050900-protein
Unique NameTCONS_00050900-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length168

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00050900-protein ID=TCONS_00050900-protein|Name=TCONS_00050900-protein|organism=Clytia hemisphaerica|type=polypeptide|length=168bp
MAADQASLLLKRQLQELTKKPVEGFSAGLVDDENLFKWEVMVMGPTDSFY
EGGFFKAHLMFPQDYPQKPPKMKFISEFWHPNVSKDGEVCISILHEPGED
KFGYERAEERWLPIHTVETILLSVISMINEPNDESPANVDAAKEWRDEYD
TTFKKNVRKCVRKSQEFL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_032261XLOC_032261Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00050900TCONS_00050900Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000608UBQ-conjugat_E2
IPR016135UBQ-conjugating_enzyme/RWD
IPR023313UBQ-conjugating_AS
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00212ubc_7coord: 8..166
e-value: 1.2E-62
score: 224.2
IPR000608Ubiquitin-conjugating enzyme E2PFAMPF00179UQ_concoord: 10..160
e-value: 3.1E-51
score: 172.6
IPR000608Ubiquitin-conjugating enzyme E2PROSITEPS50127UBIQUITIN_CONJUGAT_2coord: 8..154
score: 39.28
IPR000608Ubiquitin-conjugating enzyme E2CDDcd00195UBCccoord: 9..161
e-value: 8.39696E-61
score: 186.254
IPR016135Ubiquitin-conjugating enzyme/RWD-likeGENE3D3.10.110.10coord: 2..166
e-value: 2.3E-58
score: 197.2
IPR016135Ubiquitin-conjugating enzyme/RWD-likeSUPERFAMILY54495UBC-likecoord: 6..164
IPR023313Ubiquitin-conjugating enzyme, active sitePROSITEPS00183UBIQUITIN_CONJUGAT_1coord: 79..94

Blast
[Close]
BLAST of TCONS_00050900-protein vs. Swiss-Prot (Human)
Match: UB2G1 (Ubiquitin-conjugating enzyme E2 G1 OS=Homo sapiens GN=UBE2G1 PE=1 SV=3)

HSP 1 Score: 264.233 bits (674), Expect = 8.556e-92
Identity = 116/166 (69.88%), Postives = 144/166 (86.75%), Query Frame = 0 
Query:    1 MAADQASLLLKRQLQELTKKPVEGFSAGLVDDENLFKWEVMVMGPTDSFYEGGFFKAHLMFPQDYPQKPPKMKFISEFWHPNVSKDGEVCISILHEPGEDKFGYERAEERWLPIHTVETILLSVISMINEPNDESPANVDAAKEWRDEYDTTFKKNVRKCVRKSQE 166
            M   Q++LLL+RQL EL K PVEGFSAGL+DD +L++WEV+++GP D+ YEGG FKAHL FP+DYP +PPKMKFI+E WHPNV K+G+VCISILHEPGEDK+GYE+ EERWLPIHTVETI++SVISM+ +PN +SPANVDAAKEWR++ +  FK+ V +CVRKSQE
Sbjct:    1 MTELQSALLLRRQLAELNKNPVEGFSAGLIDDNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEIWHPNVDKNGDVCISILHEPGEDKYGYEKPEERWLPIHTVETIMISVISMLADPNGDSPANVDAAKEWREDRNGEFKRKVARCVRKSQE 166
The following BLAST results are available for this feature:
BLAST of TCONS_00050900-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
UB2G18.556e-9269.88Ubiquitin-conjugating enzyme E2 G1 OS=Homo sapiens... [more]
back to top