TCONS_00050744-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00050744-protein
Unique NameTCONS_00050744-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length454

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00050744-protein ID=TCONS_00050744-protein|Name=TCONS_00050744-protein|organism=Clytia hemisphaerica|type=polypeptide|length=454bp
MKCLLLLGLFVFAHCEVKEEKDVLVATTDNWDEVVNDGTTVLVEFYAPWC
GHCKSLEPEYAKAATKLKEEGSEVKLAKVDATIETKLAEKFGVQGFPTLK
FFKKGAALEYGGGRTENEIVNWLKKKTGPPATELADAEAVKKFTDARDVA
VVGFFNDRESELAKAFIKAADAIDSIEFGIAAPSSSGDLAVTGDKIVLTK
KFDDKRADYTGEAKSEDIAAFAKSESIALVTEFTDEAAPKIFGGDIKSHI
LLFISKKAENFASTIETFTETAKAFKGKVLFIYIDTDVEDNGRILEFFGL
KAADAPTMRLIKLEGDMTKFVPESNELSVEKITSFVQAYLDGTLKPFLMS
ADIPEDWDKNPVKVLVGKNFKEVAMSAEKNVLVEFYAPWCGHCKQLVPIW
DKLGEKFKDSADIVIAKMDSTANEVEEVKVQSFPTIKYFPKEGGVSVNYY
MEDF
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_032142XLOC_032142Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00050744TCONS_00050744Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005788Disulphide_isomerase
IPR005792Prot_disulphide_isomerase
IPR013766Thioredoxin_domain
IPR017937Thioredoxin_CS
IPR012336Thioredoxin-like_fold
Vocabulary: Molecular Function
TermDefinition
GO:0016853isomerase activity
Vocabulary: Cellular Component
TermDefinition
GO:0005783endoplasmic reticulum
Vocabulary: Biological Process
TermDefinition
GO:0045454cell redox homeostasis
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045454 cell redox homeostasis
cellular_component GO:0005783 endoplasmic reticulum
molecular_function GO:0016853 isomerase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00421THIOREDOXINcoord: 92..103
score: 49.77
coord: 41..49
score: 65.93
coord: 49..58
score: 61.11
NoneNo IPR availableGENE3D3.40.30.10coord: 229..356
e-value: 3.6E-33
score: 114.0
NoneNo IPR availableGENE3D3.40.30.10coord: 137..228
e-value: 1.5E-18
score: 66.9
NoneNo IPR availableGENE3D3.40.30.10coord: 11..136
e-value: 1.3E-33
score: 115.3
NoneNo IPR availablePFAMPF13848Thioredoxin_6coord: 155..337
e-value: 1.1E-36
score: 126.4
NoneNo IPR availableGENE3D3.40.30.10coord: 357..452
e-value: 3.1E-29
score: 101.0
NoneNo IPR availableSFLDSFLDG00345PDI-likecoord: 362..441
e-value: 8.6E-22
score: 71.8
coord: 26..127
e-value: 4.0E-33
score: 108.3
NoneNo IPR availableCDDcd02961PDI_a_familycoord: 24..123
e-value: 1.0255E-38
score: 135.431
NoneNo IPR availableCDDcd02995PDI_a_PDI_a'_Ccoord: 361..443
e-value: 2.90041E-41
score: 142.695
NoneNo IPR availableCDDcd02982PDI_b'_familycoord: 238..340
e-value: 2.64861E-21
score: 87.327
NoneNo IPR availableCDDcd02981PDI_b_familycoord: 131..225
e-value: 2.03216E-14
score: 67.7478
IPR005788Disulphide isomeraseTIGRFAMTIGR01126TIGR01126coord: 27..126
e-value: 9.0E-38
score: 126.8
IPR005792Protein disulphide isomeraseTIGRFAMTIGR01130TIGR01130coord: 21..447
e-value: 2.4E-146
score: 486.9
IPR013766Thioredoxin domainPFAMPF00085Thioredoxincoord: 362..445
e-value: 4.0E-25
score: 87.7
coord: 23..125
e-value: 1.6E-32
score: 111.5
IPR013766Thioredoxin domainPROSITEPS51352THIOREDOXIN_2coord: 326..454
score: 14.024
IPR013766Thioredoxin domainPROSITEPS51352THIOREDOXIN_2coord: 3..128
score: 15.348
IPR017937Thioredoxin, conserved sitePROSITEPS00194THIOREDOXIN_1coord: 42..60
IPR017937Thioredoxin, conserved sitePROSITEPS00194THIOREDOXIN_1coord: 382..400
IPR012336Thioredoxin-like foldSUPERFAMILY52833Thioredoxin-likecoord: 133..226
IPR012336Thioredoxin-like foldSUPERFAMILY52833Thioredoxin-likecoord: 17..130
IPR012336Thioredoxin-like foldSUPERFAMILY52833Thioredoxin-likecoord: 225..358
IPR012336Thioredoxin-like foldSUPERFAMILY52833Thioredoxin-likecoord: 354..444

Blast
[Close]
BLAST of TCONS_00050744-protein vs. Swiss-Prot (Human)
Match: PDIA1 (Protein disulfide-isomerase OS=Homo sapiens GN=P4HB PE=1 SV=3)

HSP 1 Score: 506.908 bits (1304), Expect = 1.165e-177
Identity = 247/437 (56.52%), Postives = 316/437 (72.31%), Query Frame = 0 
Query:   18 KEEKDVLVATTDNWDEVVNDGTTVLVEFYAPWCGHCKSLEPEYAKAATKLKEEGSEVKLAKVDATIETKLAEKFGVQGFPTLKFFKKG---AALEYGGGRTENEIVNWLKKKTGPPATELADAEAVKKFTDARDVAVVGFFNDRESELAKAFIKAADAIDSIEFGIAAPSSS-GDLAVTGDKIVLTKKFDDKRADYTGEAKSEDIAAFAKSESIALVTEFTDEAAPKIFGGDIKSHILLFISKKAENFASTIETFTETAKAFKGKVLFIYIDTDVEDNGRILEFFGLKAADAPTMRLIKLEGDMTKFVPESNELSVEKITSFVQAYLDGTLKPFLMSADIPEDWDKNPVKVLVGKNFKEVAMSAEKNVLVEFYAPWCGHCKQLVPIWDKLGEKFKDSADIVIAKMDSTANEVEEVKVQSFPTIKYFPKEGGVSVNYY 450
            +EE  VLV    N+ E +     +LVEFYAPWCGHCK+L PEYAKAA KLK EGSE++LAKVDAT E+ LA+++GV+G+PT+KFF+ G   +  EY  GR  ++IVNWLKK+TGP AT L D  A +   ++ +VAV+GFF D ES+ AK F++AA+AID I FGI + S       +  D +VL KKFD+ R ++ GE   E++  F K   + LV EFT++ APKIFGG+IK+HILLF+ K   ++   +  F   A++FKGK+LFI+ID+D  DN RILEFFGLK  + P +RLI LE +MTK+ PES EL+ E+IT F   +L+G +KP LMS ++PEDWDK PVKVLVGKNF++VA   +KNV VEFYAPWCGHCKQL PIWDKLGE +KD  +IVIAKMDSTANEVE VKV SFPT+K+FP     +V  Y
Sbjct:   21 EEEDHVLVLRKSNFAEALAAHKYLLVEFYAPWCGHCKALAPEYAKAAGKLKAEGSEIRLAKVDATEESDLAQQYGVRGYPTIKFFRNGDTASPKEYTAGREADDIVNWLKKRTGPAATTLPDGAAAESLVESSEVAVIGFFKDVESDSAKQFLQAAEAIDDIPFGITSNSDVFSKYQLDKDGVVLFKKFDEGRNNFEGEVTKENLLDFIKHNQLPLVIEFTEQTAPKIFGGEIKTHILLFLPKSVSDYDGKLSNFKTAAESFKGKILFIFIDSDHTDNQRILEFFGLKKEECPAVRLITLEEEMTKYKPESEELTAERITEFCHRFLEGKIKPHLMSQELPEDWDKQPVKVLVGKNFEDVAFDEKKNVFVEFYAPWCGHCKQLAPIWDKLGETYKDHENIVIAKMDSTANEVEAVKVHSFPTLKFFPASADRTVIDY 457
The following BLAST results are available for this feature:
BLAST of TCONS_00050744-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PDIA11.165e-17756.52Protein disulfide-isomerase OS=Homo sapiens GN=P4H... [more]
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