Overview
Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00050608-protein ID=TCONS_00050608-protein|Name=TCONS_00050608-protein|organism=Clytia hemisphaerica|type=polypeptide|length=414bpRun BLAST on NCBI Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Annotated Terms
The following terms have been associated with this polypeptide:
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
Blast
BLAST of TCONS_00050608-protein vs. Swiss-Prot (Human)
Match: HMCN1 (Hemicentin-1 OS=Homo sapiens GN=HMCN1 PE=1 SV=2) HSP 1 Score: 107.071 bits (266), Expect = 1.112e-24 Identity = 93/321 (28.97%), Postives = 135/321 (42.06%), Query Frame = 0 Query: 27 GAWSIWSDWSLCSSSCGNDGIQKRYRKCFSDQCLIE--------FDVDIKTCNRQRCPVQADYYT-TLWK--------------------------------------CYYWP-PVHGQWSNWS---TVNETFQNDTTCPGKLSFATRQCDSPTPEYCGMYCGSSSIKIDIF-----PVDGGWSSWSGFSSCTLSCGSGTQYRTRACDNPSSQYGGKYCEGYEREVKSCNINPC------SAWSSWSCQHCSKT-----ALRTRTCHH--------GCSGKTTETK----EMCQIESSCFPDKVISYNTGLWGSWRSWEYC 268 G +S WS W CS +CG GIQKR R C +Q L D++++ C + CPV + +LW+ C P PVHG WS W T +E+ C R C++P P + G YC + ++ + P+ G W++W+ +S+C++SCG G + RTR C +P QYGG+ CEG + + CN +PC S WS W CS+T R RTC + C G ++ + +MC ++ S WGSW SW C Sbjct: 4530 GGFSQWSAWRACSVTCGK-GIQKRSRLC--NQPLPANGGKPCQGSDLEMRNCQNKPCPVDGSWSEWSLWEECTRSCGRGNQTRTRTCNNPSVQHGGRPCEGNAVEIIMCNIRPCPVHGAWSAWQPWGTCSES------CGKGTQTRARLCNNPPPAFGGSYCDGAETQMQVCNERNCPIHGKWATWASWSACSVSCGGGARQRTRGCSDPVPQYGGRKCEGSDVQSDFCNSDPCPTHGNWSPWSGWGT--CSRTCNGGQMRRYRTCDNPPPSNGGRACGGPDSQIQRCNTDMCPVDGS-------------WGSWHSWSQC 4826 HSP 2 Score: 89.7373 bits (221), Expect = 4.379e-19 Identity = 69/190 (36.32%), Postives = 89/190 (46.84%), Query Frame = 0 Query: 27 GAWSIWSDWSLCSSSCGNDGIQKRYRKCFSDQCLIEFDVDIKTCNRQRCP---VQADYYTTLWKCYYWP-PVHGQWSNWS---TVNETFQNDTTCPGKLSFATRQCDSPTPEYCGMYCGSSSIKI-----DIFPVDGGWSSWSGFSSCTLSCGSGTQYRTRACDNPSSQYGGKYCEGYEREVKSCNINPC 204 G W+ W+ WS CS SCG G ++R R C SD + ++C VQ+D+ C P P HG WS WS T + T C G R CD+P P G CG +I D+ PVDG W SW +S C+ SCG G + R R CD+P GG+ C G +V CN+ C Sbjct: 4701 GKWATWASWSACSVSCGG-GARQRTRGC-SD--------PVPQYGGRKCEGSDVQSDF------CNSDPCPTHGNWSPWSGWGTCSRT------CNGGQMRRYRTCDNPPPSNGGRACGGPDSQIQRCNTDMCPVDGSWGSWHSWSQCSASCGGGEKTRKRLCDHPVPVKGGRPCPGDTTQVTRCNVQAC 4868 HSP 3 Score: 86.2705 bits (212), Expect = 6.062e-18 Identity = 101/320 (31.56%), Postives = 135/320 (42.19%), Query Frame = 0 Query: 94 VHG---QWSNWSTVNETFQNDTTCPGKLSFATRQCDSPTPEYCGMYCGSSSIKI-----DIFPVDGGWSSWSGFSSCTLSCGSGTQYRTRACDNPSSQYGGKYCEGYEREVKSCNINPCS---AWSSWS-----CQHCSK-TALRTRTCHHG--------CSGKTTETKEMCQIESSCFPDKVISYNTGLWGSWRSWEYCPKGTWVVKLQTN------IESHQG---DGDDTALNAISLRCNDDVGATIKSGS-TNWGTWQAESQKCINGFYGGMLKFESSQGSDDDTSTNAIRLICRDDNQWYR------SGEGGWGSW 372 VHG QWS W + TC + +R C+ P P G C S +++ PVDG WS WS + CT SCG G Q RTR C+NPS Q+GG+ CEG E+ CNI PC AWS+W + C K T R R C++ C G T+ ++C E +C G W +W SW C Q + + G +G D S CN D T G+ + W W S+ C NG G M ++ + D+ +N R D+Q R +G WGSW Sbjct: 4528 VHGGFSQWSAWRACS------VTCGKGIQKRSRLCNQPLPANGGKPCQGSDLEMRNCQNKPCPVDGSWSEWSLWEECTRSCGRGNQTRTRTCNNPSVQHGGRPCEGNAVEIIMCNIRPCPVHGAWSAWQPWGTCSESCGKGTQTRARLCNNPPPAFGGSYCDGAETQM-QVCN-ERNC-------PIHGKWATWASWSACSVSCGGGARQRTRGCSDPVPQYGGRKCEGSDVQ----SDFCNSDPCPT--HGNWSPWSGWGTCSRTC-NG--GQMRRYRTC---DNPPPSNGGRACGGPDSQIQRCNTDMCPVDGSWGSW 4820 The following BLAST results are available for this feature:
BLAST of TCONS_00050608-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens)) Total hits: 1
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