TCONS_00050446-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00050446-protein
Unique NameTCONS_00050446-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length270

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00050446-protein ID=TCONS_00050446-protein|Name=TCONS_00050446-protein|organism=Clytia hemisphaerica|type=polypeptide|length=270bp
MSDDGVEARVQGFLHKKFPGIDEDLLNYVVDVTKTSAEDFEDAEEIYDAV
GGVLHEATENDDEDEIKEICNGIMNLIKGGEEEKPQQQVNGKRILDAPIH
IGDRAKKDDEHQVEQNSIWMKQNVEDTTLKTVDLKKLERAEAKQKQKLER
RDKDDKDDESSAGPTTNQVIQKKDMKQELLGGKVVDIRIENFDLAYGSKV
LLQNCNLVMAFGRRYGFVGRNGMGKTTLLRAISKRELYIPSHVTVLHVEQ
EVVGDETLATDSVLEADTVR
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_031948XLOC_031948Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00050446TCONS_00050446Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003439ABC_transporter-like
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0016887ATPase activity
GO:0005524ATP binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0016887 ATPase activity
molecular_function GO:0005524 ATP binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 134..154
NoneNo IPR availableGENE3D3.40.50.300coord: 130..270
e-value: 1.2E-12
score: 47.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 143..173
IPR003439ABC transporter-likePFAMPF00005ABC_trancoord: 202..243
e-value: 1.5E-6
score: 28.7
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 186..245

Blast
[Close]
BLAST of TCONS_00050446-protein vs. Swiss-Prot (Human)
Match: ABCF3 (ATP-binding cassette sub-family F member 3 OS=Homo sapiens GN=ABCF3 PE=1 SV=2)

HSP 1 Score: 178.718 bits (452), Expect = 1.725e-51
Identity = 103/265 (38.87%), Postives = 162/265 (61.13%), Query Frame = 0 
Query:   14 LHKKFPGIDEDLLNYVVDVTKTSAEDFEDAEEIYDAVGGVLHEAT-ENDDEDEIKEICNGIMNLIKGGEEEKPQQQVNGKRILDAPIHIGDRAKKDDEHQVEQNSIWMKQNVEDTTLKTVDLKKLERAEAKQKQKLERRDKDDKDDESSAGP------TTNQVIQKKDMKQELLG-GKVVDIRIENFDLAYGSKVLLQNCNLVMAFGRRYGFVGRNGMGKTTLLRAISKRELYIPSHVTVLHVEQEVVGDETLATDSVLEADTVR 270
            L  +FP ID  + +YV  V  + + DFE  +++ +AVG +L E + ++ D+  I+ +C  + N ++  E   PQ Q N + +LDAPI +    +  D        +  +Q+       TV+ KKLE+AEA+ K K E+R   +KD   ++ P      + +Q   +K+ + E  G  K  D+RIENFD+++G +VLL   ++ +A+GRRYG VGRNG+GKTTLL+ ++ R L +P+H+++LHVEQEV GD+T A  SVLE+D+VR
Sbjct:    8 LRSEFPEIDGQVFDYVTGVLHSGSADFESVDDLVEAVGELLQEVSGDSKDDAGIRAVCQRMYNTLRLAE---PQSQGNSQVLLDAPIQLSKITENYDCGTKLPGLLKREQS------STVNAKKLEKAEARLKAKQEKRS--EKDTLKTSNPLVLEEASASQAGSRKESRLESSGKNKSYDVRIENFDVSFGDRVLLAGADVNLAWGRRYGLVGRNGLGKTTLLKMLATRSLRVPAHISLLHVEQEVAGDDTPALQSVLESDSVR 261
The following BLAST results are available for this feature:
BLAST of TCONS_00050446-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ABCF31.725e-5138.87ATP-binding cassette sub-family F member 3 OS=Homo... [more]
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