TCONS_00050122-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00050122-protein
Unique Name	TCONS_00050122-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	575

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00050122-protein ID=TCONS_00050122-protein|Name=TCONS_00050122-protein|organism=Clytia hemisphaerica|type=polypeptide|length=575bp
MASFTPQEMEFLQSHGNEVCRSTWLALWESSAAPEPDSREEQKVKDFLGK
KYERKMWYSSKPKAKAQAAEPEAKPLKTLLGENSPQVIVGSKQEQKSASI
KLPQSAAPTPQQPVLHQPEKKSNFDLLGDLSGDPFASSAPQPTASNSADA
FGVFAQPPPAQNQQAQQAPLFDAFGTSSTAAPTTSQPTANASFDFFASSA
GPVSTASSSATDFFAMSSNTSQQPAASSSAFGVTSDAGLSVGNNSGGDKY
AAFADLGTSSTSIFESQSSSIFGSSSFGSAPVSSSTQSIFSNNNPMNNTQ
QQQSSNNIFGAQPTQQPFQQQGQMSNFSQPQVPQQAQQNPFMTSNNAPQQ
PAQPQKPLNPFQNFSASGGSTMSQAAQLDNFGSSMVNNQNNSWGTTASSA
NSQSFSSNNMFSTQFNAQTSNTGFSMQANQNASTQPVYSNNTNYTQPQQQ
PQTQQQQNFGGNIFQQQQQQQPISQNNMFGNSQQNAQQAFNAGQQSNGFS
SQQSFGNFGAQQQQSAAPQKPFGGVQMPGFGQQPFPQQPQQQQPQQQNFG
TWGQQQQAIPQQQQPAVKLSNNPFM

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_031731	XLOC_031731	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00050122	TCONS_00050122	Clytia hemisphaerica	transcript

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 489..575
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 59..188
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 283..405
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 431..457
None	No IPR available	SUPERFAMILY	57863	ArfGap/RecO-like zinc finger	coord: 1..60

Blast

[Close]

BLAST of TCONS_00050122-protein vs. Swiss-Prot (Human)
Match: AGFG1 (Arf-GAP domain and FG repeat-containing protein 1 OS=Homo sapiens GN=AGFG1 PE=1 SV=2)

HSP 1 Score: 129.413 bits (324), Expect = 9.294e-32
Identity = 103/288 (35.76%), Postives = 142/288 (49.31%), Query Frame = 0

Query:    1 MASFTPQEMEFLQSHGNEVCRSTWLALWESSAAPEPDSREEQKVKDFLGKKYERKMWYSSKPKAKAQAA---------------EPEAKPLKTLLGENSPQVIVGSKQEQKSASIKLPQSAAPTPQQPVLHQPEKKSNFDLLGDLSGDPFASSAPQPTASNSADAFGVFAQPPPAQNQQAQQAPLFDAFGTSS---------TAAPTTSQP--------TANASFDFFASSAGPVSTASSSATDFFAMSSNTSQQPAASSSAFGVTSDAGLSVGNNSGGDKYAAFADL 256
            M +FT QE+EFLQ HGNEVC+  WL L++  ++  PD R+ QKVK+FL +KYE+K WY    +AK  A+                PE KPLK+LLG+++P + +      +S  +   Q            Q ++K  FDLL DL  D FA+ APQ TA+ +   F  F     AQN        FDAFG SS         TA+ +  QP        + NA+F  F       +   SS+ DF   +++ S Q A++ S    T+ AGL        DKYAA A+L
Sbjct:   70 MTTFTQQEIEFLQKHGNEVCKQIWLGLFDDRSSAIPDFRDPQKVKEFLQEKYEKKRWYVPPEQAKVVASVHASISGSSASSTSSTPEVKPLKSLLGDSAPTLHLNKGTPSQSPVVGRSQG-----------QQQEKKQFDLLSDLGSDIFAAPAPQSTATANFANFAHF-NSHAAQNSANADFANFDAFGQSSGSSNFGGFPTASHSPFQPQTTGGSAASVNANFAHFD------NFPKSSSADFGTFNTSQSHQTASAVSKVS-TNKAGLQT-----ADKYAALANL 333

The following BLAST results are available for this feature:

BLAST of TCONS_00050122-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00050122-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
AGFG1	9.294e-32	35.76	Arf-GAP domain and FG repeat-containing protein 1 ...	[more]

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TCONS_00050122-protein (polypeptide) - C. hemisphaerica