TCONS_00049975-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00049975-protein
Unique NameTCONS_00049975-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length376

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00049975-protein ID=TCONS_00049975-protein|Name=TCONS_00049975-protein|organism=Clytia hemisphaerica|type=polypeptide|length=376bp
MKTLVLVLLFTTACFASGSSSVAAPSIAPSVAGPSSVATGSTTAMPADPT
SMASPSSSQVASSSSMASASIASSSQVMSSSASVSPSPSSSISPSVSPSQ
SMSSSAAMSSSASMSSASMSSSMSVSPSASSSTAPASSSVTPQPPTTNPT
TTTAPKPHYDVDVQVEDEHTAKPCLWLKANISVTYSHKNVSGQISLNGKD
AKSSGTCSDLTKADDTSRVTLTWENEQIKSMTVIFSTGSKENWFVSKIGV
VLDVPLSSNGQVIANKTFKGDENTEFLHASQNKSYSCSELDTVILDSTAA
NVSIAIIDIMVQPFTHNNTMVDSKENDACSSKSKSSKSSSIVPIAVGCAL
AGLIVIVLIAYLIGRRKNDGRGYQQV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_031667XLOC_031667Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00049975TCONS_00049975Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002000Lysosome-assoc_membr_glycop
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016020 membrane
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.5.100coord: 328..371
e-value: 2.5E-5
score: 23.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 23..60
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 79..158
IPR002000Lysosome-associated membrane glycoproteinPFAMPF01299Lampcoord: 63..375
e-value: 6.0E-32
score: 111.3
IPR002000Lysosome-associated membrane glycoproteinPROSITEPS51407LAMP_3coord: 1..376
score: 23.932

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00049975-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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