TCONS_00049600-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00049600-protein
Unique NameTCONS_00049600-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length112

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00049600-protein ID=TCONS_00049600-protein|Name=TCONS_00049600-protein|organism=Clytia hemisphaerica|type=polypeptide|length=112bp
SSNPTGGNLSIENKFAIKMVLSEVTKSVCHVERNLKCLKDMPRISVQNIR
DFRGAFKKKQRVGRGPGSGRGKTSGKGHKGQGQRGTMPRIGFEGGQTPFY
RLVPKHGFTNAK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_031447XLOC_031447Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00049600TCONS_00049600Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005749Ribosomal_L15_bac-type
IPR021131Ribosomal_L18e/L15P
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Cellular Component
TermDefinition
GO:0015934large ribosomal subunit
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006412 translation
cellular_component GO:0015934 large ribosomal subunit
molecular_function GO:0003735 structural constituent of ribosome
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 108..112
NoneNo IPR availableGENE3D3.100.10.10coord: 84..112
e-value: 2.3E-6
score: 26.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 55..112
IPR005749Ribosomal protein L15, bacterial-typeTIGRFAMTIGR01071TIGR01071coord: 47..111
e-value: 3.0E-23
score: 80.2
IPR021131Ribosomal protein L18e/L15PPFAMPF00828Ribosomal_L27Acoord: 70..111
e-value: 9.4E-11
score: 42.4
IPR021131Ribosomal protein L18e/L15PSUPERFAMILY52080Ribosomal proteins L15p and L18ecoord: 48..110

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00049600-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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