TCONS_00049410-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00049410-protein
Unique NameTCONS_00049410-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length429

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00049410-protein ID=TCONS_00049410-protein|Name=TCONS_00049410-protein|organism=Clytia hemisphaerica|type=polypeptide|length=429bp
MTEELNNLLFMRTCKNYSKFKLIESLKAEKMWSFMIVVCGVFFSTVSGGQ
IYPSNEVQSVALNSDFHKNWTIQTAPNEEAKSIILYYHSGEKDPKVAWHG
SVTKLGKSTFNRSLNVNIIENTEVVVEFSNIQEAMVLYLMVHFVDDKSGE
MHAFYSNVKIVLKVDGGWSSWSGFSSCTLSCGSGTQYRTRACDNPASQYG
GKHCEGYEREEKSCNTNPCPAWSSWSCQHCSKTALRTRTCHHGCSGKTTE
TKEMCQIESSCFPDKVISYNTGLWGSWRSWEYCPKGTWVVKLQTNIESHQ
GDGDDTALNAISLRCNDDVGATIKSGSTNWGTWQAESQKCINGFYGGMLK
FESSQGSDDDTSTNAIRLICRDDNQWYRSGEGGWGSWTQSTYCPAGYKIV
GLQTQIESDQGSDDDTSLNGVRLLCRYFG
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_031364XLOC_031364Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00049410TCONS_00049410Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000884TSP1_rpt
IPR005515VOMI
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR01705TSP1REPEATcoord: 184..195
score: 47.02
coord: 166..179
score: 43.37
coord: 203..214
score: 36.38
IPR000884Thrombospondin type-1 (TSP1) repeatSMARTSM00209TSP1_2coord: 168..220
e-value: 1.9E-15
score: 67.3
IPR000884Thrombospondin type-1 (TSP1) repeatGENE3D2.20.100.10coord: 162..220
e-value: 5.3E-17
score: 61.5
IPR000884Thrombospondin type-1 (TSP1) repeatPFAMPF00090TSP_1coord: 169..219
e-value: 7.2E-10
score: 38.8
IPR000884Thrombospondin type-1 (TSP1) repeatPROSITEPS50092TSP1coord: 165..220
score: 13.514
IPR000884Thrombospondin type-1 (TSP1) repeatSUPERFAMILY82895TSP-1 type 1 repeatcoord: 163..219
IPR005515Vitelline membrane outer layer protein I (VOMI)PFAMPF03762VOMIcoord: 269..425
e-value: 1.1E-34
score: 119.9
IPR005515Vitelline membrane outer layer protein I (VOMI)GENE3D2.100.10.20coord: 260..427
e-value: 4.8E-41
score: 140.2
IPR005515Vitelline membrane outer layer protein I (VOMI)SUPERFAMILY51092Vitelline membrane outer protein-I (VMO-I)coord: 266..425

Blast
BLAST of TCONS_00049410-protein vs. Swiss-Prot (Human)
Match: HMCN1 (Hemicentin-1 OS=Homo sapiens GN=HMCN1 PE=1 SV=2)

HSP 1 Score: 93.5893 bits (231), Expect = 2.988e-20
Identity = 82/298 (27.52%), Postives = 128/298 (42.95%), Query Frame = 0
Query:   72 IQTAPNEEAKSIILYYHSGEKDPKVAWHGSVTKLGKSTFNRSLNVNIIENTEVVVEFSNIQEAMVLYLMVHFVDDKSGEMHAFYSNVKIVLKVDGGWSSWSGFSSCTLSCGSGTQYRTRACDNPASQYGGKHCEGYEREEKSCNTNPCP---AWSSWSC-QHCSKT-----ALRTRTC-----HHG---CSGKTTETKEMCQIESSCFPDKVISYNTGLWGSWRSW----EYCPKGTWV-VKLQTNIESHQG----DGDDTALNAISLRCNDDVGATIKSGSTNWGTWQAESQKCING 343
            ++T  N   K I+    +GE  P + W    ++ G S  +    VN++ N  + +  +  ++      +   +      M +    V ++++V GG+S WS + +C+++CG G Q R+R C+ P    GGK C+G + E ++C   PCP   +WS WS  + C+++       RTRTC      HG   C G   E   MC I              G W +W+ W    E C KGT    +L  N     G    DG +T +      CN+     I      W +W A S  C  G
Sbjct: 4447 VETVINAGGKIILNCQATGEPQPTITW----SRQGHS-ISWDDRVNVLSNNSLYIADAQKEDTSEFECVARNL------MGSVLVRVPVIVQVHGGFSQWSAWRACSVTCGKGIQKRSRLCNQPLPANGGKPCQGSDLEMRNCQNKPCPVDGSWSEWSLWEECTRSCGRGNQTRTRTCNNPSVQHGGRPCEGNAVEII-MCNIRPCPV--------HGAWSAWQPWGTCSESCGKGTQTRARLCNNPPPAFGGSYCDGAETQMQV----CNER-NCPIHGKWATWASWSACSVSCGGG 4719          

HSP 2 Score: 89.7373 bits (221), Expect = 6.248e-19
Identity = 49/142 (34.51%), Postives = 72/142 (50.70%), Query Frame = 0
Query:  163 KVDGGWSSWSGFSSCTLSCGSGTQYRTRACDNPASQYGGKHCEGYEREEKSCNTNPCPA---WSSWSC-QHCSKT-----ALRTRTCHH--------GCSGKTTETK----EMCQIESSCFPDKVISYNTGLWGSWRSWEYC 283
             + G W++W+ +S+C++SCG G + RTR C +P  QYGG+ CEG + +   CN++PCP    WS WS    CS+T       R RTC +         C G  ++ +    +MC ++ S             WGSW SW  C
Sbjct: 4698 PIHGKWATWASWSACSVSCGGGARQRTRGCSDPVPQYGGRKCEGSDVQSDFCNSDPCPTHGNWSPWSGWGTCSRTCNGGQMRRYRTCDNPPPSNGGRACGGPDSQIQRCNTDMCPVDGS-------------WGSWHSWSQC 4826          
The following BLAST results are available for this feature:
BLAST of TCONS_00049410-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
HMCN12.988e-2027.52Hemicentin-1 OS=Homo sapiens GN=HMCN1 PE=1 SV=2[more]
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