TCONS_00049308-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00049308-protein
Unique NameTCONS_00049308-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length510

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00049308-protein ID=TCONS_00049308-protein|Name=TCONS_00049308-protein|organism=Clytia hemisphaerica|type=polypeptide|length=510bp
MIRGFGLLKSSSTRHVLKDVYPTNRILSSVYLSTSSANPLPAPSTNKARQ
QHQNEKKSNHSDEQRQKMGNYYSMFIASAVGILGSSYILFQRFSKVEAKE
LLEDDLALDLVDGDANKKSSGQEMTLHKSQAGFRERKIIEYENRIRSYST
PDKIFRYFATLQEAYNSTIYMVPEDFVRALTPDTMQPLGLGLDKFKKFDI
KKIGPYESVHFGKDSVFHAFGDGGLISFSDYIFLLTVLGTTTRQIKIAFK
MFDLNGDGEVTLEEFKKVRSLFLSMTTTGSRHRDRNTTGNVLSQDVNTGL
ATHFFGENGEDKLTVDEFIEFKTRLQEEVMFLEFCSYNPRQGKITEIQFM
EILLIHANFGNQKHQKVVKRFKKAFEMEDGEEGKIEKIGITFQDYLDFFS
FLRSLRDVEMALSFHTVAGQAINKETFKQVAKLVAGVDLSDHIIDVVFCI
FDENQDDHLSNKEFIAVMKDKMFRGLNKPKDTGFTRLLSAIMTCAKSNIV
EAWSKPETSQ
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_031283XLOC_031283Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00049308TCONS_00049308Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR018247EF_Hand_1_Ca_BS
IPR011992EF-hand-dom_pair
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005509 calcium ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002048EF-hand domainSMARTSM00054efh_1coord: 244..272
e-value: 0.0012
score: 28.1
coord: 443..471
e-value: 0.92
score: 18.0
IPR002048EF-hand domainPFAMPF00036EF-hand_1coord: 245..268
e-value: 2.5E-6
score: 26.6
IPR002048EF-hand domainPFAMPF13833EF-hand_8coord: 419..470
e-value: 6.1E-4
score: 19.4
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 439..474
score: 10.162
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 240..275
score: 12.868
NoneNo IPR availableGENE3D1.10.1330.10coord: 260..336
e-value: 3.0E-8
score: 32.8
NoneNo IPR availableGENE3D1.10.238.10coord: 366..474
e-value: 2.6E-11
score: 42.9
NoneNo IPR availableGENE3D1.10.238.10coord: 41..259
e-value: 7.5E-9
score: 35.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 36..64
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 253..265
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 452..464
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 204..331
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 348..470

Blast
[Close]
BLAST of TCONS_00049308-protein vs. Swiss-Prot (Human)
Match: MICU1 (Calcium uptake protein 1, mitochondrial OS=Homo sapiens GN=MICU1 PE=1 SV=1)

HSP 1 Score: 379.793 bits (974), Expect = 1.787e-127
Identity = 207/450 (46.00%), Postives = 299/450 (66.44%), Query Frame = 0 
Query:   74 MFIA--SAVGILGSSYILFQRFSKVEAKELLEDDLALDLVD-------GD-ANKKSSGQEMTLH-----KSQAGFRERKIIEYENRIRSYSTPDKIFRYFATLQ---EAYNSTIYMVPEDFVRALTPDTMQPLGLGLDKF--KKFDIKKIGPYESVHFGKDSVFHAFGDGGLISFSDYIFLLTVLGTTTRQIKIAFKMFDLNGDGEVTLEEFKKVRSLFLSMTTTGSRHRDRNTTGNVLSQDVNTGLATHFFGENGEDKLTVDEFIEFKTRLQEEVMFLEFCSYNPRQGKITEIQFMEILLIHANFGNQKHQKVVKRFKKAFEMEDGEEGKIEKIGITFQDYLDFFSFLRSLRDVEMALSFHTVAGQAINKETFKQVAKLVAGVDLSDHIIDVVFCIFDENQDDHLSNKEFIAVMKDKMFRGLNKPKDTGFTRLLSAIMTCAKSNIVEAW 503
            M +A   A  +  S+ +L++R +  E+   + D+L  D+ D       GD  N +    ++  H     K ++GFR+RK++EYENRIR+YSTPDKIFRYFATL+   E   + ++M PEDFVR++TP+  QP  LGLD++  K+FD KKI         + S+F+  G+ GLISFSDYIFL TVL T  R  +IAFKMFDLNGDGEV +EEF++V+S+  S T+ G RHRDR TTGN L   + + L T+FFG + + KLT+  F+EF+ +LQ +V+ LEF  ++P  G+ITE QF  +LL ++   ++K   + ++ KK F     +EGK    G+TFQ+  +FF+FL+++ DV+ ALSF+ +AG +++K T +QVA+ VA V+LSDH+ DVVF +FD + +  LSNKEF+++MK ++ RGL KPKD GFTRL+ A+  CA+     AW
Sbjct:   34 MMVAFLGASAVTASTGLLWKR-AHAESPPCV-DNLKSDIGDKGKNKDEGDVCNHEKKTADLAPHPEEKKKKRSGFRDRKVMEYENRIRAYSTPDKIFRYFATLKVISEPGEAEVFMTPEDFVRSITPNEKQPEHLGLDQYIIKRFDGKKISQEREKFADEGSIFYTLGECGLISFSDYIFLTTVLSTPQRNFEIAFKMFDLNGDGEVDMEEFEQVQSIIRSQTSMGMRHRDRPTTGNTLKSGLCSALTTYFFGADLKGKLTIKNFLEFQRKLQHDVLKLEFERHDPVDGRITERQFGGMLLAYSGVQSKKLTAMQRQLKKHF-----KEGK----GLTFQEVENFFTFLKNINDVDTALSFYHMAGASLDKVTMQQVARTVAKVELSDHVCDVVFALFDCDGNGELSNKEFVSIMKQRLMRGLEKPKDMGFTRLMQAMWKCAQET---AW 469
The following BLAST results are available for this feature:
BLAST of TCONS_00049308-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MICU11.787e-12746.00Calcium uptake protein 1, mitochondrial OS=Homo sa... [more]
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