TCONS_00049235-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00049235-protein
Unique Name	TCONS_00049235-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	1042

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00049235-protein ID=TCONS_00049235-protein|Name=TCONS_00049235-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1042bp
MARCYMVLRIVFVLVLIASFIAIIYISKPITQDELLGSKIRKASKRHQNS
DDHEIWMQEIDLLVKQYQTKKEPDLNNPFEPVHDVEFKIENWDFPTEFTP
EKTETSVPPVKERQKAHYKQNDHVEMKPSESVNGFLNVHFWGSFCGSRIE
DLKRNIHFPYYPSEVSSLTKFYIQRYETGYGQRIFGYLHPPESGEFTFAV
SCDDNCEVWLSSSDNPNNMKLIASVGTFKDPANTKIADFQAYPSQISKPI
LLNKNNKYYVEVLHKQGAYKDHVLLTWLAPTWDHIRTINASYISSYIDVN
EQIHDVNDYRYLIPVTKACQGLEDLDVTNSIYYYNRTHNSFTMYDYREDF
FKLKSVDMSDFTNLLPRIHYNPTYVLDFMPKRYEGVKLMHESSIYPSDYT
ELTHMTRYTNCKSPRETDSHYHYLEGFEPRDDDEGYGTDLARDNYNDDYI
AVRKKVSLKRLKSKEGSFATDNVEDLRKMNAKSKHHIGKKGTGKSGSIQS
NRNEKIHFNSRNLMAFIDTQTNQNSGPVYNKRDSLKGTDFGYNKEDVKDI
MRKMKHAKASLGQGLGLAVNPMQYQYQSRGRSPSDVGPPRRQDSYTKSRV
AQVRRPGNPYGSQSYQNDGRYGLYYGGRSRRHRAKKPTVYKTKIFFKDGK
LTDSNGQKLNLTVGDKAILIHYYPLFGTATYYLATPTIRRSMWKYKTFLS
KCRTEGNLPLFSGVAVGVVNEYMKAVKKKHKSKYKLKKIVNVEENHDVLR
GDRYLIEIELSVENEASTRRLSTYIYRDAVKNKLYRPSGFVWNPKATVHV
IVPVKNQGRWVQHFIDNMEQVYLETQDVNLNVIIADFNSSDIDIKKSFDR
SRLKRYNFLNLDGPFERAFGLQAGADLVKNEDDIIFTCDLHLDIPPILID
TIRKHTIKKRLSFAPMVHRLSCGYTPDLPYGLWETEGYGLFSITKHDFDR
IGGMNTKEFKTKWGGEDWEFLDRALGHGLEVERLRVPNFFHHYHSRKKMW
QASTSSSKSSTIVPQSAYYNSRDSSSNTVVKTTSTTPNPFPE

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_031264	XLOC_031264	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00049235	TCONS_00049235	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR011658	PA14_dom
IPR029044	Nucleotide-diphossugar_trans
IPR008428	Chond_GalNAc

Vocabulary: **Molecular Function**
Term	Definition
GO:0008376	acetylgalactosaminyltransferase activity

Vocabulary: **Cellular Component**
Term	Definition
GO:0032580	Golgi cisterna membrane

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0032580	Golgi cisterna membrane
molecular_function	GO:0008376	acetylgalactosaminyltransferase activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011658	PA14 domain	SMART	SM00758	pa14_novel	coord: 143..290 e-value: 3.4E-4 score: 29.9
IPR011658	PA14 domain	PFAM	PF07691	PA14	coord: 165..280 e-value: 2.4E-12 score: 46.7
None	No IPR available	GENE3D	3.90.182.10		coord: 108..449 e-value: 5.9E-17 score: 61.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1004..1042
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 481..502
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 576..616
None	No IPR available	CDD	cd00761	Glyco_tranf_GTA_type	coord: 800..975 e-value: 5.80786E-4 score: 39.0266
None	No IPR available	SUPERFAMILY	56988	Anthrax protective antigen	coord: 247..282 coord: 183..218
IPR029044	Nucleotide-diphospho-sugar transferases	GENE3D	3.90.550.10		coord: 724..1039 e-value: 7.0E-19 score: 67.7
IPR029044	Nucleotide-diphospho-sugar transferases	SUPERFAMILY	53448	Nucleotide-diphospho-sugar transferases	coord: 772..1002
IPR008428	Chondroitin N-acetylgalactosaminyltransferase	PFAM	PF05679	CHGN	coord: 718..997 e-value: 9.9E-24 score: 83.9

Blast

[Close]

BLAST of TCONS_00049235-protein vs. Swiss-Prot (Human)
Match: B4GN4 (N-acetyl-beta-glucosaminyl-glycoprotein 4-beta-N-acetylgalactosaminyltransferase 1 OS=Homo sapiens GN=B4GALNT4 PE=1 SV=1)

HSP 1 Score: 317.775 bits (813), Expect = 2.121e-92
Identity = 151/334 (45.21%), Postives = 203/334 (60.78%), Query Frame = 0

Query:  701 KCRTEGNLPLFSGVAVGVVNEYMKAVKKKHKSKYKLKKIVNVEENHDVLRGDRYLIEIELSVENEASTRRLSTYIY------------------------RDAVKNKLYRPSGFVWNPKATVHVIVPVKNQGRWVQHFIDNMEQVYLETQDVNLNVIIADFNSSDIDIKKSFDRSRLKRYNFLNLDGPFERAFGLQAGADLVKNEDDIIFTCDLHLDIPPILIDTIRKHTIKKRLSFAPMVHRLSCGYTPDLPYGLWETEGYGLFSITKHDFDRIGGMNTKEFKTKWGGEDWEFLDRALGHGLEVERLRVPNFFHHYHSRKKMWQASTSSSKSS 1010
            +C   GNL L    AV V  +YM+ +  +H  ++ L +IVNVE+  D  RG R+L+E+EL  E      RLS Y++                        R   + +L RP    W     VH IVPVKNQ RWV  F+ +M  ++  T D   +V++ DF S D+D++++   +RL RY +L   G FER+ GLQAG D V++   I+F CDLH+  PP ++D IRKH ++ RL+FAP+V RLSCG +P  P+G WE  G+GLF I K DFDR+GGMNT+EF+ +WGGEDWE LDR L  GLEVERLR+ NF+HHYHS++ MW  S  S K S
Sbjct:  704 RCNVSGNLQLPEAEAVDVTAQYMERLNARHGGRFALLRIVNVEKRRDSARGSRFLLELELQ-ERGGGRLRLSEYVFLRLPGARVGDADGESPEPAPAASVRPDGRPELCRPLRLAWRQDVMVHFIVPVKNQARWVAQFLADMAALHARTGDSRFSVVLVDFESEDMDVERALRAARLPRYQYLRRTGNFERSAGLQAGVDAVEDASSIVFLCDLHIHFPPNILDGIRKHCVEGRLAFAPVVMRLSCGSSPRDPHGYWEVNGFGLFGIYKSDFDRVGGMNTEEFRDQWGGEDWELLDRVLQAGLEVERLRLRNFYHHYHSKRGMW--SVRSRKGS 1034

HSP 2 Score: 154.066 bits (388), Expect = 5.136e-38
Identity = 95/286 (33.22%), Postives = 143/286 (50.00%), Query Frame = 0

Query:  130 ESVNGFLNVHFWGSFCGSRIEDLKRNIHFPYYPSEVSSLTKFYIQRYETGYGQRIFGYLHPPESGEFTFAVSCDDNCEVWLSSSDNPNNMKLIASVGTFKDPANTKIADFQAYPSQISKPILLNKNNKYYVEVLHKQGAY-KDHVLLTWLA--PTWDHIRTINASYISSYIDVNEQIHDVNDYRYLIPVTKACQGLEDLDVTNSIYYYNRTHNSFTMYDYREDFFKLKSVDMSDFTNLLPRIHYNPTYVL-DFMPKRYEGVKLMHESSIYPSDYTELTHMTRYTNC 411
            E   G +N+H +  +CG  +  L+RN+HFP +P   +++ K  +      YG RIFG++HP   G+  F+V+ DDN E WLS  ++P   +L+A VG       T   +F  + SQ+SKP  L  + +YY E+LHKQ     DHV + W A  P       I++++IS Y D +    D   +   +P + A                  T       D R+ FF    ++ S   N+L    Y PTYV+ DF   RY+G++ ++ S +YP+DYT LTHM     C
Sbjct:  115 EEYKGQVNLHVFEDWCGGAVGHLRRNLHFPLFPHTRTTVKKLAVSPKWKNYGLRIFGFIHPARDGDVQFSVASDDNSEFWLSLDESPAAAQLVAFVGKTGS-EWTAPGEFTKFSSQVSKPRRLMASRRYYFELLHKQDDRGSDHVEVGWRAFLPGL-KFEVISSAHISLYTDESALKMDHVAH---VPQSPASH-------VGGRPPQEETSADMLRPDPRDTFFLTPRMESSSLENVLEPCAYAPTYVVKDFPIARYQGLQFVYLSFVYPNDYTRLTHMETDNKC 388

The following BLAST results are available for this feature:

BLAST of TCONS_00049235-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00049235-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
B4GN4	2.121e-92	45.21	N-acetyl-beta-glucosaminyl-glycoprotein 4-beta-N-a...	[more]

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TCONS_00049235-protein (polypeptide) - C. hemisphaerica