TCONS_00049014-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00049014-protein
Unique NameTCONS_00049014-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length445

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00049014-protein ID=TCONS_00049014-protein|Name=TCONS_00049014-protein|organism=Clytia hemisphaerica|type=polypeptide|length=445bp
MSAFTALVLLLALSSHSTSSTSTTTQLSANDDSVLDIAAFNVRIFGANKA
TDQTTMDILVKIILRYDLILIQEIRDSSGTAIQTLLKTLNKELKVPGASY
KMKLSPRLGRTASKEEYAYIFRSDLLRCIDSFTFNDHFDVFEREPYVVRF
KSDLAAIKEFAVAGIHTSPRDATNEVSNLTKVYDAIQQKWRLDNVIIMGD
FNAGCDFVKEWRAIGLAKDPRFYWIIDHSKDTTTGHSDCPYDRIVVAGRD
LVKNVIPLSGDVFYFDEEYQLSNRQTLLVSDHYPVHMQIKYKDEAENNRY
SHSYIAHDARIDHSLINKPTKIYQLRSQAKKQTSLFKVSENFKNTGAYQE
ITIKTEATSGLQMFANLDQLQATFNGFVSINQVKMVKRFYKNSARKGILP
HGHGRYQTLFDYYKSCSFLYTVQLVCTLEDRLNPSCSVQAKIEQQ
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_031136XLOC_031136Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00049014TCONS_00049014Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016202DNase_I
IPR005135Endo/exonuclease/phosphatase
Vocabulary: Molecular Function
TermDefinition
GO:0004536deoxyribonuclease activity
Vocabulary: Biological Process
TermDefinition
GO:0006308DNA catabolic process
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006308 DNA catabolic process
molecular_function GO:0004536 deoxyribonuclease activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016202Deoxyribonuclease IPRINTSPR00130DNASEIcoord: 187..216
score: 42.5
coord: 45..74
score: 41.67
coord: 157..186
score: 35.0
coord: 244..266
score: 45.65
coord: 267..287
score: 48.21
IPR016202Deoxyribonuclease ISMARTSM00476dnai3coord: 4..290
e-value: 1.2E-79
score: 280.6
IPR005135Endonuclease/exonuclease/phosphataseGENE3D3.60.10.10coord: 35..290
e-value: 5.3E-33
score: 114.0
IPR005135Endonuclease/exonuclease/phosphatasePFAMPF03372Exo_endo_phoscoord: 44..221
e-value: 7.4E-9
score: 35.4
IPR005135Endonuclease/exonuclease/phosphataseSUPERFAMILY56219DNase I-likecoord: 36..289
NoneNo IPR availableCDDcd10282DNase1coord: 37..289
e-value: 2.23923E-115
score: 340.755

Blast
[Close]
BLAST of TCONS_00049014-protein vs. Swiss-Prot (Human)
Match: DNSL3 (Deoxyribonuclease gamma OS=Homo sapiens GN=DNASE1L3 PE=1 SV=1)

HSP 1 Score: 227.254 bits (578), Expect = 2.848e-71
Identity = 108/263 (41.06%), Postives = 169/263 (64.26%), Query Frame = 0 
Query:   35 LDIAAFNVRIFGANKATDQTTMDILVKIILRYDLILIQEIRDSSGTAIQTLLKTLNKELKVPGASYKMKLSPRLGRTASKEEYAYIFRSDLLRCIDSFTFNDH----FDVFEREPYVVRFKSDLAAIKEFAVAGIHTSPRDATNEVSNLTKVYDAIQQKWRLDNVIIMGDFNAGCDFV--KEWRAIGLAKDPRFYWIIDHSKDTTTGHS-DCPYDRIVVAGRDLVKNVIPLSGDVFYFDEEYQLSNRQTLLVSDHYPVHMQIK 290
            + I +FNVR FG +K  D+  MD++VK+I R D+IL+ EI+DS+      L++ LN+  +  G +Y   +S RLGR   KE+YA++++  L+    S+ ++D+     DVF REP+VV F+S   A+K+F +  +HT+P  +  E+  L +VY  ++ +W+ +N I MGDFNAGC +V  K W+ I L  DPRF W+I   +DTT   S +C YDRIV+ G+++V +V+P S  VF F + Y+L+  + L VSDH+PV  +++
Sbjct:   21 MRICSFNVRSFGESKQEDKNAMDVIVKVIKRCDIILVMEIKDSNNRICPILMEKLNRNSR-RGITYNYVISSRLGRNTYKEQYAFLYKEKLVSVKRSYHYHDYQDGDADVFSREPFVVWFQSPHTAVKDFVIIPLHTTPETSVKEIDELVEVYTDVKHRWKAENFIFMGDFNAGCSYVPKKAWKNIRLRTDPRFVWLIGDQEDTTVKKSTNCAYDRIVLRGQEIVSSVVPKSNSVFDFQKAYKLTEEEALDVSDHFPVEFKLQ 282
The following BLAST results are available for this feature:
BLAST of TCONS_00049014-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
DNSL32.848e-7141.06Deoxyribonuclease gamma OS=Homo sapiens GN=DNASE1L... [more]
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