TCONS_00047953-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00047953-protein
Unique NameTCONS_00047953-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length261

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00047953-protein ID=TCONS_00047953-protein|Name=TCONS_00047953-protein|organism=Clytia hemisphaerica|type=polypeptide|length=261bp
MISFVFKIFCLIAVTCALPRHHESNPCSQGAEYWCQNEKTATECGVLEFC
KLTHSNEMAATDAKPIQIDLYYEAFCGGCRKFILEQLYPTYQKLYSTGIF
EINLYPYGNAHESQKGDKWVFDCQHGEEECQMNLIETCALHLLSHPDQFM
PYINCVENKPSIANAQKCAHDLKVDWEPISKCFNGSEGNFLEHQVAQKTE
ALVPKHTYVPWIVADGHHDETMQVYIQTGLQYWLCEHYKGTKPKECDQAM
KNEKICYKDRV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_030514XLOC_030514Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00047953TCONS_00047953Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003119SAP_A
IPR004911Interferon-induced_GILT
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003119Saposin A-type domainSMARTSM00162sapA_2coord: 23..56
e-value: 0.0039
score: 23.0
IPR003119Saposin A-type domainPFAMPF02199SapAcoord: 25..51
e-value: 4.7E-10
score: 39.4
IPR003119Saposin A-type domainPROSITEPS51110SAP_Acoord: 20..60
score: 11.077
NoneNo IPR availableGENE3D3.40.30.10coord: 51..231
e-value: 4.2E-7
score: 29.3
IPR004911Gamma interferon inducible lysosomal thiol reductase GILTPFAMPF03227GILTcoord: 67..171
e-value: 7.2E-31
score: 106.4

Blast
[Close]
BLAST of TCONS_00047953-protein vs. Swiss-Prot (Human)
Match: GILT (Gamma-interferon-inducible lysosomal thiol reductase OS=Homo sapiens GN=IFI30 PE=1 SV=3)

HSP 1 Score: 133.265 bits (334), Expect = 6.156e-38
Identity = 74/205 (36.10%), Postives = 106/205 (51.71%), Query Frame = 0 
Query:   58 MAATDAKPIQIDLYYEAFCGGCRKFILEQLYPTYQKLYSTGIFEINLYPYGNAHESQKGDKWVFDCQHGEEECQMNLIETCALHLLSHPDQFMPYINCVENKPSIANAQKCAHDL---KVDWEPISKCFNGSEGNFLEHQVAQKTEALVPKHTYVPWIVADGHHDETMQVYIQTGLQYWLCEHYKGTKPKECDQAMKN-EKICYK 258
            +  ++A  + + LYYEA CGGCR F++ +L+PT+  L    I  + L PYGNA E     +W F CQHGEEEC+ N +E C L  L     F+  I C+E    +  +      L    +  + I +C  G  G  L H  AQ+T+AL P H YVPW+  +G   E      QT L   +C+ Y+G KP  C  +  +   +C+K
Sbjct:   54 LKKSNAPLVNVTLYYEALCGGCRAFLIRELFPTW--LLVMEILNVTLVPYGNAQEQNVSGRWEFKCQHGEEECKFNKVEACVLDELDMELAFL-TIVCMEEFEDMERSLPLCLQLYAPGLSPDTIMECAMGDRGMQLMHANAQRTDALQPPHEYVPWVTVNGKPLED-----QTQLLTLVCQLYQGKKPDVCPSSTSSLRSVCFK 250
The following BLAST results are available for this feature:
BLAST of TCONS_00047953-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
GILT6.156e-3836.10Gamma-interferon-inducible lysosomal thiol reducta... [more]
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