TCONS_00047932-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00047932-protein
Unique NameTCONS_00047932-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length354

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00047932-protein ID=TCONS_00047932-protein|Name=TCONS_00047932-protein|organism=Clytia hemisphaerica|type=polypeptide|length=354bp
MDISRHFSQVLGNDNLWQRLECEYKEGKAYRYYSDGFLGELHINFPEQNP
NVCIRKPKCLLSQRVSMKQYDVWVIIQQKDTEREMDGQILRGYCTCTAGL
LGSCNHVAGLLFRLEIANLMGETRKTCTSSRCKFVEPPPSKKKVIKPGKL
SSFVFKQEKYSRLAISKTKSDSKQSLKRKLEYMPMSSSVTCKELVSEPKK
MRDIFYKSFKNVIPDSCFIQIMDVTEEVTEESKILSLKEHAKVFKDKNCY
DTETYIEAITLSDDQISKVYEKTVAQSNSEFWVEQRKGRITASKFKKVFT
RMESLKKSDQEPIPLLKEIMGEDNKKPTWQMKHGISSERHAIMRFKQTHS
HYKH
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_030497XLOC_030497Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00047932TCONS_00047932Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011604Exonuc_phg/RecB_C
IPR007527Znf_SWIM
IPR011335Restrct_endonuc-II-like
Vocabulary: Molecular Function
TermDefinition
GO:0004518nuclease activity
GO:0003677DNA binding
GO:0008270zinc ion binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003677 DNA binding
molecular_function GO:0004518 nuclease activity
molecular_function GO:0008270 zinc ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011604Exonuclease, phage-type/RecB, C-terminalGENE3D3.90.320.10coord: 255..353
e-value: 1.7E-10
score: 40.0
IPR007527Zinc finger, SWIM-typePROSITEPS50966ZF_SWIMcoord: 70..115
score: 8.333
IPR011335Restriction endonuclease type II-likeSUPERFAMILY52980Restriction endonuclease-likecoord: 268..349

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00047932-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top