TCONS_00047863-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00047863-protein
Unique NameTCONS_00047863-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length832

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00047863-protein ID=TCONS_00047863-protein|Name=TCONS_00047863-protein|organism=Clytia hemisphaerica|type=polypeptide|length=832bp
QVEKLFNPFKMTDQNEKQLLLLIDKIPNVKGVSENDMVQKVFVEEQWEVI
FSDDRVKELCAVISLDQKPDDLHSTVVDTLTGILKQKESSATTFALLGVA
CLKLLLQANWTGPDVEISEANIEFNKLVTSKEMNERSMKYFEANDDDLYS
LLKYPVLLFIAKVIFEDVVNQLSSDVLKVWSIKYFATFLKLVEDVKDRHF
TAFQNIFDDVQQFVNKSSNISRETKAEIYIDCSHIFLMFYDYRKAQECLD
LAGKILGLTASLTSALGKRTRWQQTELPQMKLNIQIDEEREKQIQPSEKL
SAGELPSDVILDNDTLLPEIKFVDGSSAITLELTATDQAYIVANCIQLRR
VKPRDALSHEEITPYCDGVLKSPQSWGVQFKALFLRCITEFSNSRKAERA
LQQLESLSLDYTKETPKGCSRQHLIQAVDLDPIWEHKRHYAQLLYSIGMT
DSALEIFLMLHLWDDVISCYQRLGRHGKAEKCIREQLAVRETATLWNLLG
DATMDKEYYEKAWEFSKYRNARSQKSLGYFYLRKHEYEQAIPHFEKSLEL
NSLQPGMAFSLGCACMGIKQLERAIKAFQASVSLDPDMFECWSNLGACFI
RTNQMKKAYKALKQASSLSYNNWRVWENFLLVAADIGNFDQMINALRRLV
DLDRKTLDREVLQILVDSVLKDEVDMNGANVGRLKKKTQQLFAHITSSIT
SDPHVWEIYAQLCLSHNTFIENEKALQHLYRSHRCYTQNHDWEQSEECLP
DVMRVTMKLIDATNLVCESEEGKNRSLSLYSTTKMSISNLILRLQKAYKD
DENNTLDSVQPHIDILQEHLTTLQNILHNMEQ
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_030466XLOC_030466Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00047863TCONS_00047863Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom
IPR013026TPR-contain_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 394..414
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 623..656
e-value: 250.0
score: 2.8
coord: 521..554
e-value: 0.0026
score: 27.0
coord: 460..493
e-value: 340.0
score: 1.5
coord: 589..622
e-value: 0.037
score: 23.2
coord: 555..588
e-value: 0.87
score: 18.6
IPR019734Tetratricopeptide repeatPFAMPF13181TPR_8coord: 559..587
e-value: 0.0082
score: 16.2
coord: 527..551
e-value: 0.088
score: 13.0
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 589..622
score: 8.408
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 623..656
score: 5.546
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 555..588
score: 8.703
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 521..554
score: 10.886
IPR011990Tetratricopeptide-like helical domainGENE3D1.25.40.10coord: 434..538
e-value: 3.5E-16
score: 58.8
IPR011990Tetratricopeptide-like helical domainGENE3D1.25.40.10coord: 539..596
e-value: 2.9E-13
score: 49.2
IPR011990Tetratricopeptide-like helical domainGENE3D1.25.40.10coord: 597..690
e-value: 2.0E-10
score: 40.0
IPR011990Tetratricopeptide-like helical domainSUPERFAMILY48452TPR-likecoord: 440..551
IPR011990Tetratricopeptide-like helical domainSUPERFAMILY48452TPR-likecoord: 689..734
coord: 520..659
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 521..656
score: 25.227

Blast
[Close]
BLAST of TCONS_00047863-protein vs. Swiss-Prot (Human)
Match: TTC27 (Tetratricopeptide repeat protein 27 OS=Homo sapiens GN=TTC27 PE=1 SV=1)

HSP 1 Score: 422.165 bits (1084), Expect = 5.171e-135
Identity = 249/785 (31.72%), Postives = 443/785 (56.43%), Query Frame = 0 
Query:   33 SENDMVQKVFVEEQWEVIFSDDRVKELC-AVISLDQKPDD-LHSTVVDTL--TGILKQKESSATTFALLGVACLKLLLQANWTGPDVEISE----ANIEFNKLVTSKEMNERSMKYFEANDDDLYSLLKYPVLLFIAKVIFEDVVNQLSS-DVLKVWSIKYFATFLKLVEDVKDRHFTAFQNIFDDVQQFVNKSSNIS-RETKAEIYIDCSHIFLMFYDYRKAQECLDLAGKILGLTASLTSALGKRTRWQQTELPQMKLNIQIDEEREKQIQPSEKLSAGELPSDVI-----LDNDTLLPEIKFVDGSSAITLELTATDQAYIVANCIQLRRVKPRDALSHEEITPYCDGVLKSPQSWGVQFKALFLRCITEFSNSRKAERALQQLESLSLDYTKETPKGCSRQHLIQAVDLDPIWEHKRHYAQLLYSIGMTDSALEIFLMLHLWDDVISCYQRLGRHGKAEKCIREQLAVRETATLWNLLGDATMDKEYYEKAWEFSKYRNARSQKSLGYFYLRKHEYEQAIPHFEKSLELNSLQPGMAFSLGCACMGIKQLERAIKAFQASVSLDPDMFECWSNLGACFIRTNQMKKAYKALKQASSLSYNNWRVWENFLLVAADIGNFDQMINALRRLVDLDRKTLDREVLQILVDSVLKDEVDMNGANVGRLKKKTQQLFAHITSSITSDPHVWEIYAQLCLSHNTFI--ENEKALQHLYRSHRCYTQNHDWEQSEECLPDVMRVTMKLIDATNLVCESEEGKNRSLSLYSTTKMSISNLILRLQKAYKD 800
            SE+    ++ +E  +E IF +   + +  +  + ++K D  L   VV  L  +  L   E     F LLGV+ L+L +Q+NWTGP V++      +++ F +    K ++   +     + + +YSL   P+LL +A++I  +V ++L++   L  W+++       L+E+     FT  +N  D V +  N   + S R    + +++C+++FL +Y+YRKA++ LD+A  I  L   LT ALGKRTR+Q+  + Q+ L+++    RE  +  + + +    P + +     L++DT+L +IK  D       +L A + A I+  C   ++  P   L+  E+  +   +L  P+ W +Q  AL LR   E  ++R+ ERA++Q ++L+  +  +T     R  +     + P W  +R  A LL+ +G T SAL+IF  L +W+DV+ CY+R G+HGKAE+ +R++L  +ET +L+ LLGD   D   Y+KAWE S+YR+AR+Q+S    +LR  E+++ +  FE+S+++N +Q G+ FSLGCA + ++  + + KAFQ  V+L+PD  E W+NL   +IR  Q  KA++ L++A   +Y +W++WEN++L + D+G F + I A  RL+DL  K  D +VL+ILV +V+    D +G     LK K Q+LF  +TS +T+D  +W +YA +  +  +    ENEKA Q L ++++C TQ++ WE+      +V++  + L        +++     ++ + S+ ++++  L+ + ++ + D
Sbjct:   29 SESGSFLQLLLEGNYEAIFLNSMTQNIFNSTTTAEEKIDSYLEKQVVTFLDYSTDLDTTERQQLIF-LLGVSSLQLFVQSNWTGPPVDLHPQDFLSSVLFQQFSEVKGLDAFVLSLLTLDGESIYSLTSKPILLLLARIILVNVRHKLTAIQSLPWWTLRCVNIHQHLLEERSPLLFTLAENCIDQVMKLQNLFVDDSGRYLAIQFHLECAYVFLYYYEYRKAKDQLDIAKDISQLQIDLTGALGKRTRFQENYVAQLILDVR----REGDVLSNCEFTPAPTPQEHLTKNLELNDDTILNDIKLADCEQFQMPDLCAEEIAIILGICTNFQKNNPVHTLTEVELLAFTSCLLSQPKFWAIQTSALILRTKLEKGSTRRVERAMRQTQALADQFEDKTTSVLERLKIFYCCQVPPHWAIQRQLASLLFELGCTSSALQIFEKLEMWEDVVICYERAGQHGKAEEILRQELEKKETPSLYCLLGDVLGDHSCYDKAWELSRYRSARAQRSKALLHLRNKEFQECVECFERSVKINPMQLGVWFSLGCAYLALEDYQGSAKAFQRCVTLEPDNAEAWNNLSTSYIRLKQKVKAFRTLQEALKCNYEHWQIWENYILTSTDVGEFSEAIKAYHRLLDLRDKYKDVQVLKILVRAVIDGMTDRSGDVATGLKGKLQELFGRVTSRVTNDGEIWRLYAHVYGNGQSEKPDENEKAFQCLSKAYKCDTQSNCWEKDITSFKEVVQRALGLAHVAIKCSKNKSSSQEAVQMLSSVRLNLRGLLSKAKQLFTD 808
The following BLAST results are available for this feature:
BLAST of TCONS_00047863-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TTC275.171e-13531.72Tetratricopeptide repeat protein 27 OS=Homo sapien... [more]
back to top