Overview
Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00046933-protein ID=TCONS_00046933-protein|Name=TCONS_00046933-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1098bpRun BLAST on NCBI Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Annotated Terms
The following terms have been associated with this polypeptide:
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
Blast
BLAST of TCONS_00046933-protein vs. Swiss-Prot (Human)
Match: CA2D3 (Voltage-dependent calcium channel subunit alpha-2/delta-3 OS=Homo sapiens GN=CACNA2D3 PE=1 SV=1) HSP 1 Score: 309.301 bits (791), Expect = 8.263e-89 Identity = 266/1044 (25.48%), Postives = 476/1044 (45.59%), Query Frame = 0 Query: 70 EVPTVDVFELFATRLTRTLLSKEYALERIKEGAIQSYKTFHFNPHFKY------------LDSTKVKNMTQKVVQFSTHFN---ISYNTSFVHVPVEIYDRSEEVVAASIFTKALDQVFIANRANDKQLVSAWQHFGSSSGLWRNFPGKERNRYTFEISRSTSSNRKIDLYDCRRRLWYNQAINSPKDVVILMDMSGSMTGAHFKISKLIVQSLLDTLQQDDFFNVLYFNQATGFLIDCLNDTLAQATSYNKNQFKQAVTRLQSPKSVANFPTALKKAFRLINKVSTHRATSSSSCNKVIMLISDGIDFDEHTHEILDDENAEKEVVIFSYIVGQSTDEGRAEMKDIACQSGGEHYDFPTVGNVLDGVLKYQKRLSQPLGQSLDDHVIFTPLYLDGS-----------GLGMMTTISTAVFSNKNDSDTRE-LIGVAGMDIVVSLLQQQYPVQKMGVFGHAFAINNNGLFLMHPKFK-----DQSGYLPDPATVYLDEVEFTTNPSKGIELKRAMINNETGCMNAEADWLFPKHSSQRVVRLNNTYCYRPMEKTPFFAGVSMPQQNAIQMVADKTKAHLFRRSGINALHSDDPNVIIEVAEWSFCDIRTEGEKKQPASIKYYPTAEDLYQYLKNNDEDLDEKCDEEMLLTLLLSASVVANFTRDHWSVEELTHNNITD-----AYIITSSGFT----YILSTDVNNTKRL----DRDIFEEIRFTHPASFYQKEFHNQLTFSVDIKSGKPQNLHDKEVFNNEEIGNIAIGKSVYTGDENTMLGVVGMSVRVDFMNRIMHEAAQNIT--DSDCS---KNSSQKCYLIDENGYIVATNRPVNRVGYFLGWYEGQLIEDMEKREILEVREYNDTQAECPQQSDTSSSS-----PAN-ILKTFYYTVFQLVYNVLAHTLAITWWMLTSLLTVSMNAIGVSAASRNVSCTKTIEIYLLKNRSIDTEGAFNCSSNCSQKYIIQSIPDTNLAQVIINNNCRGADECPLFSKNNEPKRTRDLTVCE--QPLRYRRALSVCYKL-TGEDKRAC 1054 E+ + + + A + K A+ R+ E A +++ F+ +Y D ++ + ++ + HFN ++ + S V VP +Y++ +V ++++L++VF+ N D L+ WQ+FGS+ G +R +PG I N I +DCR R WY QA SPKDVVIL+D+SGSM G I+K V S+LDTL DDFFN++ +N+ ++ CLN TL QA NK F++ + +L + K + AL +AF +++ + S C++ IMLI+DG D + +++V IF+Y++G+ +K +AC + G T+ +V + V++Y LS+P + V++T Y+D + G +MTT++ VFS +N++ ++ L+GV G D+ V L + P K+G+ G+AFAI NNG L HP+ + + P+ ++V L EVE+ + L+ AM+N +TG + E K +RV+ + N Y Y ++ TPF GV++ + + + ++ G++ L D ++ EWS+C+ E + + + E + YLK + L +CD+E++ +L A VV+ +W+ L + +D A++ T +G + ++ + + N L +IF F ++ +S+ +G N + + + ++ ++ VG+ ++++F R A++ D CS + + CYLID NG+I+ + + G F G EG ++ + + D QA C ++S + P N L + + +LV ++ L +WW M A C ++ + +T G C +CS+ ++IQ IP +NL V+++++C P+ E + L CE + + RR C+ E+ R C Sbjct: 81 EIDGLQLVKKLAKNMEEMFHKKSEAVRRLVEAAEEAHLKHEFDADLQYEYFNAVLINERDKDGNFLELGKEFILAPNDHFNNLPVNISLSDVQVPTNMYNKDPAIVNGVYWSESLNKVFVDNFDRDPSLI--WQYFGSAKGFFRQYPG---------IKWEPDENGVI-AFDCRNRKWYIQAATSPKDVVILVDVSGSMKGLRLTIAKQTVSSILDTLGDDDFFNIIAYNEELHYVEPCLNGTLVQADRTNKEHFREHLDKLFA-KGIGMLDIALNEAFNILSDF--NHTGQGSICSQAIMLITDGA-VDTYDTIFAKYNWPDRKVRIFTYLIGREAAFAD-NLKWMACANKGFFTQISTLADVQENVMEYLHVLSRPKVIDQEHDVVWTEAYIDSTLPQAQKLTDDQGPVLMTTVAMPVFSKQNETRSKGILLGVVGTDVPVKELLKTIPKYKLGIHGYAFAITNNGYILTHPELRLLYEEGKKRRKPNYSSVDLSEVEWE---DRDDVLRNAMVNRKTGKFSMEVKKTVDK--GKRVLVMTNDYYYTDIKGTPFSLGVALSRGHGKYFF----RGNVTIEEGLHDLEHPDVSL---ADEWSYCNTDLHPEHRHLSQL------EAIKLYLKGKEPLL--QCDKELIQEVLFDA-VVSAPIEAYWTSLALNKSENSDKGVEVAFLGTRTGLSRINLFVGAEQLTNQDFLKAGDKENIFNADHFPLWYRRAAEQIPGSFVYSIPFSTGP---------VNKSNVVTASTSIQLLDERKSPVVAAVGIQMKLEFFQRKFWTASRQCASLDGKCSISCDDETVNCYLIDNNGFILVS-EDYTQTGDFFGEIEGAVMNKLLTMGSFKRITLYDYQAMCRANKESSDGAHGLLDPYNAFLSAVKWIMTELVLFLVEFNLC-SWWH------SDMTAKAQKLKQTLEPCDTEYPAFVSERTIKETTGNIAC-EDCSKSFVIQQIPSSNLFMVVVDSSCLCESVAPITMAPIEIRYNESLK-CERLKAQKIRRRPESCHGFHPEENAREC 1067 The following BLAST results are available for this feature:
BLAST of TCONS_00046933-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens)) Total hits: 1
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