TCONS_00046652-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00046652-protein
Unique NameTCONS_00046652-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length267

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00046652-protein ID=TCONS_00046652-protein|Name=TCONS_00046652-protein|organism=Clytia hemisphaerica|type=polypeptide|length=267bp
MQIDREEEGKMPNERKVTVLDSFQESSMINMNFTEISKEAEEQAWPEGRS
GHCICSDNENFLYVFGGYNPKDSHSIYNQLWRYNTSSNVWTILPDKENGS
PLSGASISMTYWDQKIITFGGTGYPFAEQNSNHLSLYCLRSYKWFNLTKL
AKDQAIIQGRDENETKVKQCGCTEKRNAAPNPKYGQSITISPAGKLYVFA
GTLGLEFENDLHSFCLHNMFWTAHNFCSIHRDTIPEPRYRHASISKDNRF
YVLGGATSYRIFGFRYL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_029778XLOC_029778Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00046652TCONS_00046652Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015915Kelch-typ_b-propeller
IPR015916Gal_Oxidase_b-propeller
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015915Kelch-type beta propellerGENE3D2.120.10.80coord: 165..264
e-value: 7.3E-12
score: 44.4
IPR015916Galactose oxidase, beta-propellerGENE3D2.130.10.80coord: 20..157
e-value: 1.9E-19
score: 69.3
NoneNo IPR availablePFAMPF13418Kelch_4coord: 48..95
e-value: 1.8E-11
score: 43.7
NoneNo IPR availableSUPERFAMILY117281Kelch motifcoord: 180..258
coord: 44..150

Blast
[Close]
BLAST of TCONS_00046652-protein vs. Swiss-Prot (Human)
Match: KLD10 (Kelch domain-containing protein 10 OS=Homo sapiens GN=KLHDC10 PE=1 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.080e-27
Identity = 72/228 (31.58%), Postives = 108/228 (47.37%), Query Frame = 0 
Query:   46 PEGRSGHCICSDNENFLYVFGGYNP---------KDSHSIYNQLWRYNTSSNVWTILPDKENGSPLSGASISMTYWDQKIITFGGTGYPFAEQNSNHLSLYCLRSYKWFNLTKLAKDQAIIQGRDENETKVKQCGCTEKRNAAPNPKYGQSITISPAGKLYVFAGTLGLEFENDLHSFCLHNMFWTAHNFCSIHRDTIPEPRYRHASISKDNRFYVLGGATSYRIFGF 264
            P  RSGH   +DN N LYVFGGYNP          + + ++ +LWRY+ ++ VW  +   +   P   AS+S+      ++ FGGTG PF E N N + +  ++  +W          A++  R +  +++                YGQ++ I   G LYVF GT G  +  DLH   L+   WT     ++  D +PE RYRH       R Y+LGG TS+  +  
Sbjct:   89 PPARSGHRCVADNTN-LYVFGGYNPDYDESGGPDNEDYPLFRELWRYHFATGVWHQM-GTDGYMPRELASMSLVLHGNNLLVFGGTGIPFGESNGNDVHVCNVKYKRW----------ALLSCRGKKPSRI----------------YGQAMAII-NGSLYVFGGTTGYIYSTDLHKLDLNTREWTQLKPNNLSCD-LPEERYRHEIAHDGQRIYILGGGTSWTAYSL 286
The following BLAST results are available for this feature:
BLAST of TCONS_00046652-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
KLD101.080e-2731.58Kelch domain-containing protein 10 OS=Homo sapiens... [more]
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