TCONS_00046491-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00046491-protein
Unique NameTCONS_00046491-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length161

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00046491-protein ID=TCONS_00046491-protein|Name=TCONS_00046491-protein|organism=Clytia hemisphaerica|type=polypeptide|length=161bp
LESTKDVPSKYILTKNKKFSKVKILNEGLKAVPKDGIAMILDLQMQIPLD
FFDRTRKLTIAGKTAFSPTLMHFQDPCLHERYTELALKKVIWQYDGPGIM
AMYKSDWSRVGGFNEKMFADKWGGEDWELVDRIIATGIQIIHYRLPRFYH
LYHSRKKMWNH
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_029675XLOC_029675Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00046491TCONS_00046491Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008428Chond_GalNAc
IPR029044Nucleotide-diphossugar_trans
Vocabulary: Molecular Function
TermDefinition
GO:0008376acetylgalactosaminyltransferase activity
Vocabulary: Cellular Component
TermDefinition
GO:0032580Golgi cisterna membrane
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0032580 Golgi cisterna membrane
molecular_function GO:0008376 acetylgalactosaminyltransferase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008428Chondroitin N-acetylgalactosaminyltransferasePFAMPF05679CHGNcoord: 12..155
e-value: 6.0E-18
score: 64.8
IPR029044Nucleotide-diphospho-sugar transferasesGENE3D3.90.550.10coord: 2..161
e-value: 2.1E-13
score: 49.7
IPR029044Nucleotide-diphospho-sugar transferasesSUPERFAMILY53448Nucleotide-diphospho-sugar transferasescoord: 16..160

Blast
[Close]
BLAST of TCONS_00046491-protein vs. Swiss-Prot (Human)
Match: B4GN4 (N-acetyl-beta-glucosaminyl-glycoprotein 4-beta-N-acetylgalactosaminyltransferase 1 OS=Homo sapiens GN=B4GALNT4 PE=1 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 2.481e-29
Identity = 56/161 (34.78%), Postives = 85/161 (52.80%), Query Frame = 0 
Query:    7 VPSKYILTKNKKFSKVKILNEGLKAVPK-DGIAMILDLQMQIPLDFFDRTRKLTIAGKTAFSPTLMHF------QDPCLHERYTELALKKVIWQYDGPGIMAMYKSDWSRVGGFNEKMFADKWGGEDWELVDRIIATGIQIIHYRLPRFYHLYHSRKKMWN 160
            +P    L +   F +   L  G+ AV     I  + DL +  P +  D  RK  + G+ AF+P +M        +DP  +            W+ +G G+  +YKSD+ RVGG N + F D+WGGEDWEL+DR++  G+++   RL  FYH YHS++ MW+
Sbjct:  879 LPRYQYLRRTGNFERSAGLQAGVDAVEDASSIVFLCDLHIHFPPNILDGIRKHCVEGRLAFAPVVMRLSCGSSPRDPHGY------------WEVNGFGLFGIYKSDFDRVGGMNTEEFRDQWGGEDWELLDRVLQAGLEVERLRLRNFYHHYHSKRGMWS 1027
The following BLAST results are available for this feature:
BLAST of TCONS_00046491-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
B4GN42.481e-2934.78N-acetyl-beta-glucosaminyl-glycoprotein 4-beta-N-a... [more]
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