TCONS_00045784-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00045784-protein
Unique NameTCONS_00045784-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length271

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00045784-protein ID=TCONS_00045784-protein|Name=TCONS_00045784-protein|organism=Clytia hemisphaerica|type=polypeptide|length=271bp
MRYCQIIMGPAGSGKSTYCKYMHEHCENIKRTVTIVNLDPAAEHFSYPVS
IDIRELVAVDDVMEAEDLRLGPNGGLVFCMEYLQQNFDWLKQELGEGEDD
YFIFDCPGQIELYTHIPVMKELVHTLQSWDFSICGVFLMDAQFLIDAAKF
FSGAMSALSAMVQLEVPFINVLSKMDLLSKESADNLERYLCPNAPEIVND
LNQSLPVKFKKLNEAIAGVIDDYALVNFLPLNINEEESLNDLLIYIDNAI
QYGEGLEPREDMLGDEADEDD
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_029261XLOC_029261Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00045784TCONS_00045784Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004130Gpn
IPR027417P-loop_NTPase
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004130GPN-loop GTPasePFAMPF03029ATP_bind_1coord: 7..252
e-value: 1.5E-86
score: 290.0
NoneNo IPR availableGENE3D3.40.50.300coord: 1..253
e-value: 2.8E-55
score: 186.8
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 6..252

Blast
[Close]
BLAST of TCONS_00045784-protein vs. Swiss-Prot (Human)
Match: GPN3 (GPN-loop GTPase 3 OS=Homo sapiens GN=GPN3 PE=1 SV=2)

HSP 1 Score: 337.421 bits (864), Expect = 2.700e-117
Identity = 155/260 (59.62%), Postives = 204/260 (78.46%), Query Frame = 0 
Query:    2 RYCQIIMGPAGSGKSTYCKYMHEHCENIKRTVTIVNLDPAAEHFSYPVSIDIRELVAVDDVMEAEDLRLGPNGGLVFCMEYLQQNFDWLKQELGEGEDDYFIFDCPGQIELYTHIPVMKELVHTLQSWDFSICGVFLMDAQFLIDAAKFFSGAMSALSAMVQLEVPFINVLSKMDLLSKESADNLERYLCPNAPEIVNDLNQSL-PVKFKKLNEAIAGVIDDYALVNFLPLNINEEESLNDLLIYIDNAIQYGEGLEPRE 260
            RY Q++MGPAGSGKSTYC  M +HCE + R+V +VNLDPAAEHF+Y V  DIREL+ VDDVME + LR GPNGGLVFCMEY   NFDWL+  LG  EDDY +FDCPGQIELYTH+PVMK+LV  L+ W+F +CGVFL+D+QF++++ KF SG ++ALSAM+ LE+P +N+++KMDLLSK++   +E++L P+   ++ D    L   KFKKL +AI G+IDDY++V FLP + ++EES+N +L +ID AIQYGE LE +E
Sbjct:    3 RYAQLVMGPAGSGKSTYCATMVQHCEALNRSVQVVNLDPAAEHFNYSVMADIRELIEVDDVMEDDSLRFGPNGGLVFCMEYFANNFDWLENCLGHVEDDYILFDCPGQIELYTHLPVMKQLVQQLEQWEFRVCGVFLVDSQFMVESFKFISGILAALSAMISLEIPQVNIMTKMDLLSKKAKKEIEKFLDPDMYSLLEDSTSDLRSKKFKKLTKAICGLIDDYSMVRFLPYDQSDEESMNIVLQHIDFAIQYGEDLEFKE 262
The following BLAST results are available for this feature:
BLAST of TCONS_00045784-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
GPN32.700e-11759.62GPN-loop GTPase 3 OS=Homo sapiens GN=GPN3 PE=1 SV=... [more]
back to top