TCONS_00045689-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00045689-protein
Unique NameTCONS_00045689-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1194

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00045689-protein ID=TCONS_00045689-protein|Name=TCONS_00045689-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1194bp
MSWFDPGALSKYSSYAKTALKTAQKNIDKVLEINDETEDTNTATASSITK
VITGPNDIRSKHDDLTEQETTVKPADHKRSTSRSPSRQTSVSSDVEQSSS
SGLGDGFFSSFLNSSTPKQSSPASSPKTKTRSTKSSTDQSATDIVTPDKA
SSTQLEDDFQTPPNDVKSTETLFTPSENITHISKDQSTDEFFTPTKKSHN
TLSTRTLNLKEDSLSDTKDLSTLDKDESLIDTPVKVVDDKSKDFIESSPN
GTKDNETIDTNDIDSIDXDKKKDFIESSPNGTKDNEIIDTNDIDSIDQTE
KNGSDQTENETNIPECSNMDSKRTVESFDPITEDTKKSIEERNRNFDSTA
ESSGDFLENIAKEDLNNSTTNVPLETGDSGYVETPPPLKQVVENESDNEI
EESNLINEPTANSDNEIQESNLINEPTANSDNAIEESHTVDEKLEVGHIS
ANCAEESNSIGNVVDIEKISESIDTEHALKDDTGVAEKGLDKVDRTFKME
PVDSMVKEDSNEVDLTKEEDLEESVAPHDLIADGTSHLEQEFRRVQSLLE
AREEQLVEYSKQNISYQESIAVYRNQLEQMESMRVTEDAEMEQLRKEFTG
RISESESKLKSVLRERDQLKLSLEETQTHLQQSADQQITSLTSSLIEKEE
RIKDLLEEGEALSKKELDSNNKIKKFRAKLKEVNAKSEASTKKIEEHEAK
IETLKISLSEKENHLKEIDGERQKLERMTDSQEDEITLLKEKLDDLLEKH
EATETTLKSAYMEIDKLNLEKAQQISEVNEANASAEVRSELEQKLKEVEK
QSKFGKEELQEQLLDLQTEYSRLEQQSARKEENFKREIQDLHKRIEDGES
RNQELSQSVTAVTKPLLRQIENLQHSHSNQSENWDRIERNLTERVGQLQQ
EMLLSSEKERSATDIAQEMKSKVKSLDVQVKSLKSEKKKFESSLEEETTK
NREMEEFVQKHKNTTEKQLKKLKLRYEDIVKERAFLEEQLSTEKVKYEND
ILQLNAKLSSQQEQYNLQRQQSSNRSLNNSRRNSGSSVTLEDREISSFTN
EVERPSLAKRHQRNLSSTSSLNGSILSDYSMNTATAESMERLQRQLKRRD
GEVYVLQEEVKTLEKTKASLAQELVNLSNQIELLESDSQELVILKASFKD
LESRYGAVLQMYGEKEEETEELKMDLQDIRNMYKQQIQQLLGES
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_029202XLOC_029202Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00045689TCONS_00045689Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022091TMF_TATA-bd
IPR022092TMF_DNA-bd
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 1162..1189
NoneNo IPR availableCOILSCoilCoilcoord: 1089..1137
NoneNo IPR availableCOILSCoilCoilcoord: 602..629
NoneNo IPR availableCOILSCoilCoilcoord: 638..665
NoneNo IPR availableCOILSCoilCoilcoord: 916..950
NoneNo IPR availableCOILSCoilCoilcoord: 673..756
NoneNo IPR availableCOILSCoilCoilcoord: 764..858
NoneNo IPR availableCOILSCoilCoilcoord: 962..1021
NoneNo IPR availableCOILSCoilCoilcoord: 577..597
NoneNo IPR availableCOILSCoilCoilcoord: 20..40
NoneNo IPR availableGENE3D1.20.5.50coord: 903..1011
e-value: 0.21
score: 10.8
NoneNo IPR availableGENE3D1.20.120.330coord: 1012..1192
e-value: 0.002
score: 17.3
coord: 666..795
e-value: 0.0017
score: 17.5
NoneNo IPR availableGENE3D1.20.5.320coord: 796..890
e-value: 8.9E-5
score: 21.9
NoneNo IPR availableGENE3D1.20.1000.10coord: 13..665
e-value: 1.8E-4
score: 20.1
NoneNo IPR availableSUPERFAMILY57997Tropomyosincoord: 590..771
IPR022091TATA element modulatory factor 1 TATA bindingPFAMPF12325TMF_TATA_bdcoord: 1082..1190
e-value: 5.3E-27
score: 94.2
IPR022092TATA element modulatory factor 1 DNA bindingPFAMPF12329TMF_DNA_bdcoord: 641..712
e-value: 1.8E-12
score: 46.9

Blast
[Close]
BLAST of TCONS_00045689-protein vs. Swiss-Prot (Human)
Match: TMF1 (TATA element modulatory factor OS=Homo sapiens GN=TMF1 PE=1 SV=2)

HSP 1 Score: 294.664 bits (753), Expect = 3.316e-83
Identity = 235/655 (35.88%), Postives = 386/655 (58.93%), Query Frame = 0 
Query:  549 LEAREEQLVEYSKQNISYQESIAVYRNQLEQMESMRVTEDAE-MEQLRKEFTGRISESESKLKSVLRERDQLKLSLEETQTHLQQSADQQITSLTSSLI-EKEERIKDLLEEGEALSKKELDSNNKIKKFRAKLKEVNAKSEASTKKIEEHEAKIETLKISLSEKENHLKEIDGERQKLERMTDSQEDEITLLKEKLDDLLEKHEATETTLKSAYMEIDKLNLEKAQQISEVNEANASAEVRS--ELEQKLKEVEKQSKFGKEELQEQLLDLQTEYSRLEQQSARKEENFKREIQDLHKRIEDGESRNQELSQSVTAVTKPLLRQIENLQHSHSNQSENWDRIERNLTERVGQLQQEMLLSSEKERSATDIAQEMKSKVKSLDVQVKSLKSEKKKFESSLEEETTKNREMEEFVQKHKNTTEKQLKKLKLRY----EDIVKERAFLEEQLSTEKVKYENDILQLNAKLSSQQEQYNLQRQQSSNRSLNNSRRNSGSSVTLEDREISSFTNEVERPSLAKRHQRNLSSTS-SLNGSILSDYSMNTATAESMERLQRQLKRRDGEVYVLQEEVKTLEKTKASLAQELVNLSNQIELLESDSQELVILKASFKDLESRYGAVLQMYGEKEEETEELKMDLQDIRNMYKQQIQQLLGES 1194
            LE RE QL+  SK+    +E+    ++++      RV E++  +  L+ EFT RI+E+E K++   +ERD  K  ++  +  L   A +  +S T+ L+ EK+E+I+ L+EEGE LSK++L ++N IKK RAK KE         KK++E E +++ LK  L  KE   K+     +KL  M + QE ++  L+  +D+L EK+ + +  L SAY E+  L+   A + SE  EA  S E+++  EL   L++ +++++  +E L  Q+ DL+    R EQ +ARKE+  + EI +L +R+++ E+RNQELSQSV++ T+PLLRQIENLQ +  +Q+ +W+++E+NL++R+G+ Q  +  + E+ER+AT+     K ++ S++ Q   L+ E  +F++ LE E  KNR  +  ++   N  + +L+ LK  Y    E+  KE+  L  QL  E++K E +  +  A  + +  +   ++  S + +   SR +S S V +   + S  + +       + H  +      S NGS L D     A +  +E LQ QLK R+GE+  LQ E+  LEKT++ +A+ELV L+NQ + LE   +E+  L+   +DL+ RY  +LQMYGEK EE EEL++DL+D++NMYK QI +LL +S
Sbjct:  458 LEKREAQLLSLSKEKALLEEAFDNLKDEM-----FRVKEESSSISSLKDEFTQRIAEAEKKVQLACKERDAAKKEIKNIKEEL---ATRLNSSETADLLKEKDEQIRGLMEEGEKLSKQQLHNSNIIKKLRAKDKENENMVAKLNKKVKELEEELQHLKQVLDGKEEVEKQHRENIKKLNSMVERQEKDLGRLQVDMDELEEKNRSIQAALDSAYKELTDLHKANAAKDSEAQEAALSREMKAKEELSAALEKAQEEARQQQETLAIQVGDLRLALQRTEQAAARKEDYLRHEIGELQQRLQEAENRNQELSQSVSSTTRPLLRQIENLQATLGSQTSSWEKLEKNLSDRLGESQTLLAAAVERERAATEELLANKIQMSSMESQNSLLRQENSRFQAQLESE--KNRLCK--LEDENNRYQVELENLKDEYVRTLEETRKEKTLLNSQLEMERMKVEQE--RKKAIFTQETIKEKERKPFSVSSTPTMSRSSSISGVDMAGLQTSFLSQD-------ESHDHSFGPMPISANGSNLYDAVRMGAGSSIIENLQSQLKLREGEITHLQLEIGNLEKTRSIMAEELVKLTNQNDELEEKVKEIPKLRTQLRDLDQRYNTILQMYGEKAEEAEELRLDLEDVKNMYKTQIDELLRQS 1091
The following BLAST results are available for this feature:
BLAST of TCONS_00045689-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TMF13.316e-8335.88TATA element modulatory factor OS=Homo sapiens GN=... [more]
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