TCONS_00044826-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00044826-protein
Unique NameTCONS_00044826-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length118

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00044826-protein ID=TCONS_00044826-protein|Name=TCONS_00044826-protein|organism=Clytia hemisphaerica|type=polypeptide|length=118bp
ITSINHPVDFNEEQLEDELVRRGVVNLFVAIFVILALAFVPASFVVYLIE
DRVSKSKHLQLVSGLNPVVYWLANFIWDLINYLIPALCCIIIFFAFNQQA
YVSAQNFPATFCLLLLYG
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_028435XLOC_028435Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00044826TCONS_00044826Clytia hemisphaericatranscript
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF12698ABC2_membrane_3coord: 4..118
e-value: 6.1E-25
score: 87.9

Blast
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BLAST of TCONS_00044826-protein vs. Swiss-Prot (Human)
Match: ABCA2 (ATP-binding cassette sub-family A member 2 OS=Homo sapiens GN=ABCA2 PE=1 SV=3)

HSP 1 Score: 147.132 bits (370), Expect = 3.759e-42
Identity = 61/118 (51.69%), Postives = 88/118 (74.58%), Query Frame = 0 
Query:    1 ITSINHPVDFNEEQLEDELVRRGVVNLFVAIFVILALAFVPASFVVYLIEDRVSKSKHLQLVSGLNPVVYWLANFIWDLINYLIPALCCIIIFFAFNQQAYVSAQNFPATFCLLLLYG 118
            IT  NHP++     L  + + +G  ++ +AIF+I+A++FVPASFVV+L+ ++ +K+KHLQ VSG NP++YWLAN++WD++NYL+PA CC+II F F+  AY S  NFPA   L LLYG
Sbjct: 1767 ITVTNHPMNKTSASLSLDYLLQGT-DVVIAIFIIVAMSFVPASFVVFLVAEKSTKAKHLQFVSGCNPIIYWLANYVWDMLNYLVPATCCVIILFVFDLPAYTSPTNFPAVLSLFLLYG 1883
The following BLAST results are available for this feature:
BLAST of TCONS_00044826-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ABCA23.759e-4251.69ATP-binding cassette sub-family A member 2 OS=Homo... [more]
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