TCONS_00044230-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00044230-protein
Unique NameTCONS_00044230-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length415

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00044230-protein ID=TCONS_00044230-protein|Name=TCONS_00044230-protein|organism=Clytia hemisphaerica|type=polypeptide|length=415bp
MYFRTQKRAXIPFNEFPKEFCEKNNASSLKHKDFVDEAILKLLKNKCISE
LKNVPKFCNPLTVAENKGKLRLVIDLRNINDHVVKHKFQYEDLHTLSETM
NKNDFFTTFDLKTGYYHIGIRPEQQKFLGFQWTFKDNSTRYFQFVVLPMG
LSTACYVFTKVLRPFVSKWRGQGIKAIIYLDDGILSGKSQEETSEASDIA
RRDIENSGLVLNLEKSDFNPRQEGQWLGTVINTKVMKFFVPKNKVNSLLQ
RINTALSQALVCAKQLSYIAGHLSSMHAAIGPSTRMFTRGIYRDIESRIS
WYNFFEPSTDTKSELKFWSKNLKNHDGYSMKHSPAHTKVIFSDASDSGFG
GFVCERLNRKVCAGSFSSLESSSSSTYRELLAIKYVLQSFSRFLTGETIQ
INTDNQNASRILTIG
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_027872XLOC_027872Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00044230TCONS_00044230Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000477RT_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.10.10.10coord: 11..148
e-value: 2.0E-17
score: 62.8
NoneNo IPR availableGENE3D3.30.70.270coord: 149..235
e-value: 5.9E-13
score: 48.2
NoneNo IPR availableCDDcd03714RT_DIRS1coord: 109..231
e-value: 5.02941E-26
score: 100.111
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 27..412
IPR000477Reverse transcriptase domainPFAMPF00078RVT_1coord: 75..229
e-value: 2.7E-15
score: 56.4
IPR000477Reverse transcriptase domainPROSITEPS50878RT_POLcoord: 1..231
score: 12.627

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00044230-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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