TCONS_00043842-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00043842-protein
Unique NameTCONS_00043842-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length526

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00043842-protein ID=TCONS_00043842-protein|Name=TCONS_00043842-protein|organism=Clytia hemisphaerica|type=polypeptide|length=526bp
ELTKNQIPRTDKYFIDYLGDPLCNSIRFRQITPTAVLKLINDLDAQKASG
PSSIPTSFLKMISPTASTILSHIFNVNIKEGIYPDCLKKANIKPLHKKDS
KLDIGSYRPISLLSNINKIFEKLLHFRLVKFFENNNIFSEKQFGTNHAVI
ALTEVVRSALDNGNFAAGVFIDLKKAFDTVEHTILLHKLVHYGIRGPALA
LLRSYLSNRTHCVDIRNTHSGHVIIKHGVPQGSVSGPLLFIIYINDLHRS
LENSVTIHFADDTSLNICCDKSIKHLNRKLNRDLALLVHWLRANKICLNA
SKTEIILLRSPRNTFTKHLNFRLSGQKLHLSSKAKYLGILLDEHLSWEPQ
IHSVSNKLSRTVGFLSKLRHFVDFKTLLSVYYALFDSHINYCLQTLGHTT
QASFEKIEVLQNKALRVIHFKYSRHSARPLFIRSSILPVKKQLKVKNCLF
ALDHIQNNLPKYFSNYLRYSPVHEGTRQSPKKLEPPTTNTVKYGSYSVAS
LITKDWNELHTKVLIQDFSKCSKSNS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_027512XLOC_027512Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00043842TCONS_00043842Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000477RT_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.70.270coord: 127..340
e-value: 6.1E-24
score: 84.1
NoneNo IPR availableCDDcd01650RT_nLTR_likecoord: 89..341
e-value: 4.38045E-48
score: 166.312
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 38..311
IPR000477Reverse transcriptase domainPFAMPF00078RVT_1coord: 96..339
e-value: 3.8E-42
score: 144.2
IPR000477Reverse transcriptase domainPROSITEPS50878RT_POLcoord: 76..341
score: 22.097

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00043842-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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