TCONS_00043618-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00043618-protein
Unique NameTCONS_00043618-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length144

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00043618-protein ID=TCONS_00043618-protein|Name=TCONS_00043618-protein|organism=Clytia hemisphaerica|type=polypeptide|length=144bp
QDFVIGLSNCLHGDSEKKLQWAFRVYDNEEKGYLLEDELFNVLTYIYNLI
GIKIQDDEKEKLMEHTSGLFELLDIDSDGRISEEEFVNGCLKNHDMVEAL
TDYQPPVTDFILESDNDSVRSYCCHLTNGRVKRRQRSKSKLAQV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_027304XLOC_027304Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00043618TCONS_00043618Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR018247EF_Hand_1_Ca_BS
IPR011992EF-hand-dom_pair
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005509 calcium ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00450RECOVERINcoord: 32..50
score: 25.71
coord: 81..101
score: 30.95
coord: 10..29
score: 43.27
NoneNo IPR availableGENE3D1.10.238.10coord: 34..78
e-value: 2.5E-9
score: 36.8
NoneNo IPR availableGENE3D1.10.238.10coord: 1..33
e-value: 2.7E-5
score: 23.4
NoneNo IPR availableGENE3D1.10.238.10coord: 79..118
e-value: 6.4E-4
score: 19.2
IPR002048EF-hand domainSMARTSM00054efh_1coord: 65..93
e-value: 2.5
score: 14.5
coord: 18..46
e-value: 5.4
score: 11.9
IPR002048EF-hand domainPFAMPF13499EF-hand_7coord: 17..88
e-value: 2.6E-9
score: 37.3
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 61..96
score: 9.799
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 14..49
score: 9.855
IPR002048EF-hand domainCDDcd00051EFhcoord: 18..89
e-value: 1.30766E-7
score: 43.6905
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 74..86
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 1..106

Blast
[Close]
BLAST of TCONS_00043618-protein vs. Swiss-Prot (Human)
Match: CSEN (Calsenilin OS=Homo sapiens GN=KCNIP3 PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 7.612e-16
Identity = 34/101 (33.66%), Postives = 61/101 (60.40%), Query Frame = 0 
Query:    1 QDFVIGLSNCLHGDSEKKLQWAFRVYDNEEKGYLLEDELFNVLTYIYNLIGIKIQDDEKE-KLMEHTSGLFELLDIDSDGRISEEEFVNGCLKNHDMVEAL 100
            +DFV+GLS  L G   +KL+WAF +YD  + GY+ ++E+  ++  IY+++G       +E    EH    FE +D + DG ++ EEF+  C K+ +++ ++
Sbjct:  149 EDFVVGLSILLRGTVHEKLKWAFNLYDINKDGYITKEEMLAIMKSIYDMMGRHTYPILREDAPAEHVERFFEKMDRNQDGVVTIEEFLEACQKDENIMSSM 249
The following BLAST results are available for this feature:
BLAST of TCONS_00043618-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CSEN7.612e-1633.66Calsenilin OS=Homo sapiens GN=KCNIP3 PE=1 SV=1[more]
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