TCONS_00021264-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00021264-protein
Unique NameTCONS_00021264-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length292

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00021264-protein ID=TCONS_00021264-protein|Name=TCONS_00021264-protein|organism=Clytia hemisphaerica|type=polypeptide|length=292bp
MEAISEFYKWAESISDPRVADWFLIPSPLPTYSMSFFYVIFSWKIGPYLM
HNREPFNLKYLLIIYNLSMVYLNYHIFKELLFGMLEAGYSYPCQPFLTST
RPVDFRIARALWWYFASKLIEFIDTLFFILRKKDNQISFLHVYHHATMPM
LWWIGTKWVPAGQSAPAAILNAFIHIIMYFYYGVAAFGPSLQKYLWWKRY
LTQMQLIQFCIALGTATYSLYSGCDFPRWMSWALILYMISFLVLFGNFYI
QAYLTKKKKKNDELRNGEMKTSVKGTSRDNNGELRSRNKISS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_011901XLOC_011901Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00021264TCONS_00021264Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002076ELO_fam
IPR030457ELO_CS
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002076ELO familyPFAMPF01151ELOcoord: 27..261
e-value: 2.8E-61
score: 207.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 262..292
IPR030457ELO family, conserved sitePROSITEPS01188ELOcoord: 137..145

Blast
[Close]
BLAST of TCONS_00021264-protein vs. Swiss-Prot (Human)
Match: ELOV4 (Elongation of very long chain fatty acids protein 4 OS=Homo sapiens GN=ELOVL4 PE=1 SV=1)

HSP 1 Score: 311.227 bits (796), Expect = 3.779e-106
Identity = 158/285 (55.44%), Postives = 195/285 (68.42%), Query Frame = 0 
Query:    6 EFYKWAESISDPRVADWFLIPSPLPTYSMSFFYVIFSWKIGPYLMHNREPFNLKYLLIIYNLSMVYLNYHIFKELLFGMLEAGYSYPCQPFLTSTRPVDFRIARALWWYFASKLIEFIDTLFFILRKKDNQISFLHVYHHATMPMLWWIGTKWVPAGQSAPAAILNAFIHIIMYFYYGVAAFGPSLQKYLWWKRYLTQMQLIQFCIALGTATYSLYSGCDFPRWMSWALILYMISFLVLFGNFYIQAYLTKKKKKNDELRNGEMKTSVKGTSRDNNGELRSRNKI 290
            EFY+W  SI+D RV +W L+ SP PT S+S  Y++F W +GP  M +REPF ++ +LIIYN  MV LN  IF+EL  G   AGYSY CQ    S    + RIA ALWWYF SK +E++DT+FFILRKK+NQ+SFLHVYHH TM  LWWIG KWV  GQ+   A LN+FIH+IMY YYG+ AFGP +QKYLWWKRYLT +QLIQF + +G    SLY+ C FP+WM WALI Y ISF+ LF NFYI+ Y   KK K         KT++ G S   NG  +S  ++
Sbjct:   24 EFYRWTWSIADKRVENWPLMQSPWPTLSISTLYLLFVW-LGPKWMKDREPFQMRLVLIIYNFGMVLLNLFIFRELFMGSYNAGYSYICQSVDYSNNVHEVRIAAALWWYFVSKGVEYLDTVFFILRKKNNQVSFLHVYHHCTMFTLWWIGIKWVAGGQAFFGAQLNSFIHVIMYSYYGLTAFGPWIQKYLWWKRYLTMLQLIQFHVTIGHTALSLYTDCPFPKWMHWALIAYAISFIFLFLNFYIRTYKEPKKPKAG-------KTAMNGISA--NGVSKSEKQL 298
The following BLAST results are available for this feature:
BLAST of TCONS_00021264-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ELOV43.779e-10655.44Elongation of very long chain fatty acids protein ... [more]
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