TCONS_00020995-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00020995-protein
Unique Name	TCONS_00020995-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	500

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00020995-protein ID=TCONS_00020995-protein|Name=TCONS_00020995-protein|organism=Clytia hemisphaerica|type=polypeptide|length=500bp
YRLKNELKSLKKKGMGYLRGAENDLSNFSKFVQKADTILKKLRVSSSKLS
RDSNDGIFQVEEKPKESEATLLPSARYHPETILQHCRFLLPLSKKRQNFV
KEMLRSTERAAPSVKPIIRVDRRVPVNERYKHGQPSTVFMQIFSSLKNKD
FLHYRWNKKSYSQWWEVKFYGEGIIDQGGGFRDSLTEMSEELCPPLLDQE
HCLPFLVRTPNHVTRVGEHMDCFTLNPSCRNFEAYKWLGQLFGACFRTGE
TLPLSLPPMLWKMLVGEHVSWKDDFIHIDDAAVRNTDGLANLEADAYKAL
NVEQTYSTMLSNQKEIELLPGGFDMVVQCEDRTKYSEMVRKARMMESIEQ
LKTLRGGLLTVLPEPVLSCLTWSRLERGVCGNPNISVADLKANCRYGDGL
SSSSPSVNHMWAALSTFTDEERSRFLRFITGRKRLPSPFIVFRASSEGGT
LSQSLNSILPSASTCGSNLFLPEYTTAEIATEKLRYAIYNCIAIDTDTSP

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_011776	XLOC_011776	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00020995	TCONS_00020995	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000569	HECT_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0004842	ubiquitin-protein transferase activity

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0004842	ubiquitin-protein transferase activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000569	HECT domain	SMART	SM00119	hect_3	coord: 155..493 e-value: 1.1E-19 score: 81.3
IPR000569	HECT domain	PFAM	PF00632	HECT	coord: 224..491 e-value: 9.4E-50 score: 169.7
IPR000569	HECT domain	PROSITE	PS50237	HECT	coord: 157..499 score: 40.587
IPR000569	HECT domain	SUPERFAMILY	56204	Hect, E3 ligase catalytic domain	coord: 150..491
None	No IPR available	GENE3D	3.90.1750.10		coord: 91..300 e-value: 6.9E-25 score: 87.0
None	No IPR available	GENE3D	3.30.2410.10		coord: 381..494 e-value: 1.7E-25 score: 89.0

Blast

[Close]

BLAST of TCONS_00020995-protein vs. Swiss-Prot (Human)
Match: HECD3 (E3 ubiquitin-protein ligase HECTD3 OS=Homo sapiens GN=HECTD3 PE=1 SV=1)

HSP 1 Score: 365.54 bits (937), Expect = 1.533e-117
Identity = 191/428 (44.63%), Postives = 262/428 (61.21%), Query Frame = 0

Query:   82 ILQHCRFLLPLSKKRQNFVKEMLRSTERAAPSVKPIIRVDRRVPVNERYKHGQ----PSTVFMQIFSSLKNKDF----LHYRWNKKSYSQWWEVKFYGEGIIDQGGGFRDSLTEMSEELCPPLLDQEHCLPFLVRTPNHVTRVGEHMDCFTLNPSCRNFEAYKWLGQLFGACFRTGETLPLSLPPMLWKMLVGEHVSWKDDFIHIDDAAVRNTDGLANLEADAYK-ALNVEQTYSTMLSNQKEIELLPGGFDMVVQCEDRTKYSEMVRKARMMESIEQLKTLRGGLLTVLPEPVLSCLTWSRLERGVCGNPNISVADLKANCRYGDGLSSSSPSVNHMWAALSTFTDEERSRFLRFITGRKRLPSPFIVFRASSEGGTLSQSLNSILPSASTCGSNLFLPEYTTAEIATEKLRYAIYNCIAIDTDTSP 500
            I Q  +FLL LS++R   V + LR +E + PS  P + ++RR+ +  R    +     + VF Q++  LK  D     L YRW  + Y QWWE KF  EGIIDQGGGFRDSL +MSEELCP   D    LPF VRT N     GE  D +  NPSCR+F  Y+W+GQL GA  R  E L L+LP  +WK L GE VSW  DF  +D   V+  + +  ++ + ++     E T++T+LS+Q+ +EL+PGG  +VV   DR+++ ++V+KAR+ ES EQ+  ++ GLL V+P+ VL  LTW  LE+ VCG+P ++V  L+   R+ D    S   V + W AL+ FT+E+RSRFLRF+TGR RLP+   ++        L       LP +STC S LFLP Y +A++  EKLRYA YNC+AIDTD SP
Sbjct:  439 IKQVKQFLL-LSRQRPGLVAQCLRDSESSKPSFMPRLYINRRLAMEHRACPSRDPACKNAVFTQVYEGLKPSDKYEKPLDYRWPMR-YDQWWECKFIAEGIIDQGGGFRDSLADMSEELCPSSADTPVPLPFFVRTANQGNGTGEARDMYVPNPSCRDFAKYEWIGQLMGAALRGKEFLVLALPGFVWKQLSGEEVSWSKDFPAVDSVLVKLLEVMEGMDKETFEFKFGKELTFTTVLSDQQVVELIPGGAGIVVGYGDRSRFIQLVQKARLEESKEQVAAMQAGLLKVVPQAVLDLLTWQELEKKVCGDPEVTVDALRKLTRFED-FEPSDSRVQYFWEALNNFTNEDRSRFLRFVTGRSRLPARIYIY-----PDKLGYETTDALPESSTCSSTLFLPHYASAKVCEEKLRYAAYNCVAIDTDMSP 858

The following BLAST results are available for this feature:

BLAST of TCONS_00020995-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00020995-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
HECD3	1.533e-117	44.63	E3 ubiquitin-protein ligase HECTD3 OS=Homo sapiens...	[more]

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TCONS_00020995-protein (polypeptide) - C. hemisphaerica