TCONS_00020286-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00020286-protein
Unique NameTCONS_00020286-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length343

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00020286-protein ID=TCONS_00020286-protein|Name=TCONS_00020286-protein|organism=Clytia hemisphaerica|type=polypeptide|length=343bp
MAEYNDCLDKQRVKEPGIILGNEGPNEDSHDIKLGNDEDYNESQGSTENE
GPSHYNNIIHHKDKAVSVSCQNSEDLSKNRILTTPPISDSESMIEDQNLS
TDDNDSKTIISENLTQSLSNDCQDSKTSLNGSPSIDTDDADTPQNVCRIC
YGNDEEEQLVAPCKCLGTVQYMHESCLLTWLKSGATHCELCKTNYNFKRI
LKPYSERKWPNVRSWHIGWIVKELVLLDWFHFLETVLCCITLMLINRMAS
YDLVYQFALIALFELFYYGLNIWSCFYLLFYTRWSALNLEVHVLNYNCDE
DQTSYRKFSDFLISGLESYTSLLRKNRRLRMVVNSIEEHDFAA
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_011388XLOC_011388Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00020286TCONS_00020286Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011016Znf_RING-CH
IPR013083Znf_RING/FYVE/PHD
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0008270 zinc ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011016Zinc finger, RING-CH-typeSMARTSM00744ringv_2coord: 146..192
e-value: 1.8E-17
score: 74.1
IPR011016Zinc finger, RING-CH-typePFAMPF12906RINGvcoord: 147..191
e-value: 6.3E-14
score: 51.7
IPR011016Zinc finger, RING-CH-typePROSITEPS51292ZF_RING_CHcoord: 139..198
score: 19.547
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 140..198
e-value: 3.8E-17
score: 61.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 119..140
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 15..56
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 77..107
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 142..196

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00020286-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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