TCONS_00019874-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00019874-protein
Unique NameTCONS_00019874-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length431

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00019874-protein ID=TCONS_00019874-protein|Name=TCONS_00019874-protein|organism=Clytia hemisphaerica|type=polypeptide|length=431bp
MQKEQLTLLRQFVGACKANPQLLHSPELNFFKEWLESQGATIPAAEKKEA
SNEPAQEEKEEEKPTKSPEPAAEPAAEPQKQEPESEEEVESDLDLDELDG
IIKDEDETSLEMGDETIEVTDEMLELSNDKRSAAMGAKNDGNLDECITLF
TEAIKNNPVSASLYAKRAQVLIMMKKPNAAIKDCDKAISINKDSAAPYKW
RGRAYRMLGDYLKAFHDFQTSNGLDYDDSVHEWLNEVKANAKKIMEHNRK
YERLHEERERKNKRKEAKRRREEAQKEYERQQREQQQSSSGGFPGGFPGG
FPGGFPGGMPGGMGGGMPGGMGGGMPGGFGGMPGGMGGGMPGGMGGGMPG
GMGQGMGGGMPGGASGGGMPDFSALFSDPELMGAMQDPEVMAAFQDVSKN
PENIKKYENNPKVKNVIEKLQSKFGGAGGAK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_011187XLOC_011187Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00019874TCONS_00019874Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006636STI1_HS-bd
IPR019734TPR_repeat
IPR013026TPR-contain_dom
IPR034649Hip_N
IPR011990TPR-like_helical_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0046983protein dimerization activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
molecular_function GO:0046983 protein dimerization activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 234..284
NoneNo IPR availableGENE3D1.25.40.120coord: 44..230
e-value: 2.1E-18
score: 66.0
NoneNo IPR availableGENE3D1.25.40.120coord: 231..424
e-value: 0.0039
score: 15.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 41..99
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 345..375
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 254..316
IPR006636Heat shock chaperonin-bindingSMARTSM00727CBMcoord: 378..417
e-value: 1.6E-10
score: 51.0
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 127..160
e-value: 330.0
score: 1.6
coord: 161..194
e-value: 0.002
score: 27.4
coord: 195..228
e-value: 94.0
score: 6.4
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 127..228
score: 14.145
IPR034649Hsp70-interacting protein, N-terminalCDDcd14438Hip_Ncoord: 3..43
e-value: 1.57192E-16
score: 72.1958
IPR011990Tetratricopeptide-like helical domainSUPERFAMILY48452TPR-likecoord: 139..228

Blast
[Close]
BLAST of TCONS_00019874-protein vs. Swiss-Prot (Human)
Match: F10A1 (Hsc70-interacting protein OS=Homo sapiens GN=ST13 PE=1 SV=2)

HSP 1 Score: 270.011 bits (689), Expect = 2.948e-87
Identity = 188/426 (44.13%), Postives = 251/426 (58.92%), Query Frame = 0 
Query:    1 MQKEQLTLLRQFVGACKANPQLLHSPELNFFKEWLESQGATIPAAEKKEASNEPAQEEKEEEKPTKSPEPAAEPAAEPQKQEPESEEEVESDLDLDELDGIIKDEDETSLEMGDETIEVTDEMLELSNDKRSAAMGAKNDGNLDECITLFTEAIKNNPVSASLYAKRAQVLIMMKKPNAAIKDCDKAISINKDSAAPYKWRGRAYRMLGDYLKAFHDFQTSNGLDYDDSVHEWLNEVKANAKKIMEHNRKYERLHEERERKNKRKEAKRRREEAQKEYERQQREQQQSSSGGFPGGFPGGFPGGFPGGMPGGMGGGMPGGMGGGMPGGFGGMPGGMGGGMPGGMGGGMPGGMGQGMGGGMPGGASGGGMPDFSALFSDPELMGAMQDPEVMAAFQDVSKNPENIKKYENNPKVKNVIEKLQSKFGG 426
            M   ++  LR FV  CK +P +LH+ E+ F +EW+ES G  +P A +K  S E  +EEK + K  +    A EP++E            ESDL++D+ +G+I+ + +   EMGDE  E+T+EM++ +NDK+ AA+ A NDG L + I LFT+AIK NP  A LYAKRA V + ++KPNAAI+DCD+AI IN DSA PYKWRG+A+R+LG + +A HD   +  LDYD+     L EV+  A+KI EH RKYER  EERE K + +  K+ REE    +ER QRE++     G                      G  PGG  GGMPG F G   GMGGGMPG  G                           + + SDPE++ AMQDPEVM AFQDV++NP N+ KY++NPKV N+I KL +KFGG
Sbjct:    1 MDPRKVNELRAFVKMCKQDPSVLHTEEMRFLREWVESMGGKVPPATQKAKSEENTKEEKPDSKKVEEDLKADEPSSE------------ESDLEIDK-EGVIEPDTDAPQEMGDENAEITEEMMDQANDKKVAAIEALNDGELQKAIDLFTDAIKLNPRLAILYAKRASVFVKLQKPNAAIRDCDRAIEINPDSAQPYKWRGKAHRLLGHWEEAAHDLALACKLDYDEDASAMLKEVQPRAQKIAEHRRKYERKREEREIKERIERVKKAREE----HERAQREEEARRQSG-------------------AQYGSFPGGFPGGMPGNFPGGMPGMGGGMPGMAGMPG-----------------------LNEILSDPEVLAAMQDPEVMVAFQDVAQNPANMSKYQSNPKVMNLISKLSAKFGG 367
The following BLAST results are available for this feature:
BLAST of TCONS_00019874-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
F10A12.948e-8744.13Hsc70-interacting protein OS=Homo sapiens GN=ST13 ... [more]
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