TCONS_00018993-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00018993-protein
Unique NameTCONS_00018993-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length154

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00018993-protein ID=TCONS_00018993-protein|Name=TCONS_00018993-protein|organism=Clytia hemisphaerica|type=polypeptide|length=154bp
MAATRRLNKELSDIRKSQYKLLRDINVDESNILNWKGKICTDQPPYNLGA
FEIEINFPAEYPFKPPKITFKTKIYHPNIDEKGQVCLPIISPENWKPATK
TDQVIQALVALVNMPEPEHPLRGDLAEEYTKNKKAFFQKAADFTKKHALQ
RPPE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_010646XLOC_010646Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00018993TCONS_00018993Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016135UBQ-conjugating_enzyme/RWD
IPR000608UBQ-conjugat_E2
IPR023313UBQ-conjugating_AS
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00212ubc_7coord: 5..149
e-value: 5.0E-49
score: 178.9
IPR016135Ubiquitin-conjugating enzyme/RWD-likeGENE3D3.10.110.10coord: 1..154
e-value: 1.2E-48
score: 165.4
IPR016135Ubiquitin-conjugating enzyme/RWD-likeSUPERFAMILY54495UBC-likecoord: 2..150
IPR000608Ubiquitin-conjugating enzyme E2PFAMPF00179UQ_concoord: 6..141
e-value: 4.7E-42
score: 142.9
IPR000608Ubiquitin-conjugating enzyme E2PROSITEPS50127UBIQUITIN_CONJUGAT_2coord: 5..138
score: 33.523
IPR000608Ubiquitin-conjugating enzyme E2CDDcd00195UBCccoord: 4..144
e-value: 2.60393E-48
score: 153.897
IPR023313Ubiquitin-conjugating enzyme, active sitePROSITEPS00183UBIQUITIN_CONJUGAT_1coord: 75..90

Blast
[Close]
BLAST of TCONS_00018993-protein vs. Swiss-Prot (Human)
Match: UB2L3 (Ubiquitin-conjugating enzyme E2 L3 OS=Homo sapiens GN=UBE2L3 PE=1 SV=1)

HSP 1 Score: 232.261 bits (591), Expect = 1.390e-79
Identity = 110/152 (72.37%), Postives = 128/152 (84.21%), Query Frame = 0 
Query:    1 MAATRRLNKELSDIRKSQYKLLRDINVDESNILNWKGKICTDQPPYNLGAFEIEINFPAEYPFKPPKITFKTKIYHPNIDEKGQVCLPIISPENWKPATKTDQVIQALVALVNMPEPEHPLRGDLAEEYTKNKKAFFQKAADFTKKHALQRP 152
            MAA+RRL KEL +IRK   K  R+I VDE+N+L W+G I  D PPY+ GAF IEINFPAEYPFKPPKITFKTKIYHPNIDEKGQVCLP+IS ENWKPATKTDQVIQ+L+ALVN P+PEHPLR DLAEEY+K++K F + A +FTKK+  +RP
Sbjct:    1 MAASRRLMKELEEIRKCGMKNFRNIQVDEANLLTWQGLIVPDNPPYDKGAFRIEINFPAEYPFKPPKITFKTKIYHPNIDEKGQVCLPVISAENWKPATKTDQVIQSLIALVNDPQPEHPLRADLAEEYSKDRKKFCKNAEEFTKKYGEKRP 152
The following BLAST results are available for this feature:
BLAST of TCONS_00018993-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
UB2L31.390e-7972.37Ubiquitin-conjugating enzyme E2 L3 OS=Homo sapiens... [more]
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