TCONS_00018500-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00018500-protein
Unique NameTCONS_00018500-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length504

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00018500-protein ID=TCONS_00018500-protein|Name=TCONS_00018500-protein|organism=Clytia hemisphaerica|type=polypeptide|length=504bp
MDWVQVHKKRKKSETKSSPNNSSFFTTSSSSSSSSSTRKAMVTPKVSRSL
ILISSTSNLFDQQTAQHDHIKCRPDGVHHEKEIEQSYQYHTPHTSINPQV
NQQIFIGNLKHDMEDITLVRKLQQLFKDSVDLEIPEFRFTIFQRDSKKHP
RKYGYLNLATLRDEEKAYKLDGLTNLDFVIEGLALNVNKRLSTRNRVTKW
NKLTFNGRRRLVNRSRSDTDVQADDKSNLKAQSSKRELMYGQNLPSEDRV
TEYKKGGGNYLRCTLIQHVRKYVCAFLNSEGGRLMIGVDDTCKVFGVSCT
RKQEDLARCQIDNTIKQFQPHVAPHMYMVEFIPVRLVPHDNVEFDCIDPL
LKVLKISVVRQNMMAATLYVNDKENIFLRRDGSVEGPLKIPQIIEWCRTQ
FSQNNIPHNDQDTPALLSHSNSVNFEKILDQLSKRQNEVLAQMEESFHSA
SMELQEKIKLLQVVINTKENQVTQITQNLFDALKRLEQERKRQKHRTDYM
CTIC
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_010374XLOC_010374Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00018500TCONS_00018500Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007421Schlafen_AAA_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005524 ATP binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 451..471
NoneNo IPR availableCOILSCoilCoilcoord: 476..496
NoneNo IPR availableGENE3D3.30.70.330coord: 5..237
e-value: 1.4E-5
score: 24.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 215..241
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..40
IPR007421Schlafen, AAA domainPFAMPF04326AlbA_2coord: 247..384
e-value: 3.1E-26
score: 92.0

Blast
[Close]
BLAST of TCONS_00018500-protein vs. Swiss-Prot (Human)
Match: SLNL1 (Schlafen-like protein 1 OS=Homo sapiens GN=SLFNL1 PE=2 SV=2)

HSP 1 Score: 140.969 bits (354), Expect = 5.233e-37
Identity = 70/169 (41.42%), Postives = 100/169 (59.17%), Query Frame = 0 
Query:  234 SKRELMYGQNLPSEDRVTEYKKGGGNYLRCTLIQHVRKYVCAFLNSEGGRLMIGVDDTCKVFGVSCTRKQEDLARCQIDNTIKQFQPHVAPHMYMVEFIPVRLVPHDNVEFDCIDPLLKVLKISV-VRQNMMAATLYVNDKENIFLRRDGSVEGPLKIPQIIEWCRTQF 401
             K +L  G  L SE R  E+K+G G YL      HVR+YVCAFLNSEGG L++GV+D+  V G+ C+ + ED AR  +D+ ++ F+P + P  Y + FIPV      +V        LKV++++V   +      LY  D+  +FLRRDGS++GPL    I EWCR ++
Sbjct:  208 GKDQLFQGAFLGSETRNMEFKRGSGEYLSLAFKHHVRRYVCAFLNSEGGSLLVGVEDSGLVQGIRCSHRDEDRARLLVDSILQGFKPQIFPDAYTLTFIPVISTSETSVP-------LKVIRLTVHTPKAQSQPQLYQTDQGEVFLRRDGSIQGPLSASAIQEWCRQRW 369
The following BLAST results are available for this feature:
BLAST of TCONS_00018500-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SLNL15.233e-3741.42Schlafen-like protein 1 OS=Homo sapiens GN=SLFNL1 ... [more]
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