TCONS_00017405-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00017405-protein
Unique NameTCONS_00017405-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2002

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00017405-protein ID=TCONS_00017405-protein|Name=TCONS_00017405-protein|organism=Clytia hemisphaerica|type=polypeptide|length=2002bp
MEKRNKVGPSPQAIVYSSTIVSPMATEASLSSTISAAINSSNFSPADTIP
SESTTVITAAPQAPQQILLPNTPPVKNAVGHAAILPIAANPSLSSQRGSQ
DLQRGVIYALNQYSPFLSLSRPPTNVHPSLSGVDNEHHSKLGPEDVAEVR
QMTSAVAATSFHEHSRRSEAGKCQSGGELRLTELSHKLNNLHVPEGFVLV
GAKSPMLTGMMLVAAVDKRYLPGEKDTLTTPGFSGNCVGCGATGFRYFTE
FSTHINLKLATQPKKQKHLKCYITQAVDGKWGKGHLIPWKGTETKKRSHI
TNPMPIIQQNQPGFQNYHERFSEYHKFPSRPSLIPVEEPPAKKQKAEEET
ELSNDIPPPTLINNQKTSLFTPYKEHSPITTEEATTPEPKNQVKFSDDTN
EDTLESLNRSMSAICGVRPVLLLCHEISKKLPNSVDDLVVSDLLVGCFDF
PDTLIPSVLEETSIDYPLDPAADKLREQTAANTLINMGSGTQPPVNKNHF
DGKSWPSVSARLKEAATTTLPLNAAIILFTQYLINLDESGINKENIELVL
NKARIEMSTSTINSLFIQSQSVASTHAQLSLMINLQCSASNGKVRVMTST
ISFQNALYKALQWLNETFYVSKVANKKMKTPDFVIILSTPPEGPVEFAVL
VTGVSHAKILAESLRIDSVVCKDFTESLKKLRAQFSQTDTALNRLIKVHE
RNQGEKVFYPFNEFPGKKLSIEEAEVMHPKQAPLSAKPYHTKGVFANQAA
MAHQLLKQLRNVAENPDILDLASFLHVDICIVVPPVASLYYMTVKRLCES
GVLNFLGLEQLDVTGNHKLGEKYVITYDDWPASIEKWTKFVNNIQSRNDT
LHLLIFDQAQRFSLPQGMPDILPNLKEVFESVNVIPVFVTSVPYMFQTNK
SFIDPDNEIYWTDTQQGSAFSKYTDDERVMINDQDMLYFGVKELCDSTRW
NQQFSLIRTEETLDWALPKANRLNDINYSIVQGYVLLRLYQASLMVGAGV
KPAEPYAVMSFITMVNDIIEAPLHNTDGSGSMLMIRIPNRQLSKHFHDVL
LKTRNSLGLQYRFDVIHDDGDSELEIGEHFLARMRRWKIMRGWKEEHVKN
WKPKCLEELLDLPCFLILSGEDRSGETLPRSLKYADFNILNQSKFHRSTI
EAEIGMCSCYLMINGGTHSALSNRPAVMNNLRTSCGTTYLNPQKQGTECD
INHSLEPNSDGSDNCEACLSKDVAKQHMDTCTHFSSKYPLPIVLISKPLW
LMLNSDQGDTRGLVHLNSDPNTRWFRSSRPLLMTSKPDRISRYYRRWTEP
RPARKMVTTPAAPSTMPSPGGSFIDDDCDTQSHNEVDQILASPPKRQPIE
RRDSEQIDHEDKDNEDSDKAQYHPRCFLFSGPPQAGKTGSYLYFAYLLHR
MLMRLKRVDVYDNCVTYTPSTFDDKETCADVDVIANWQFLSKFLDMRREK
FSRIHVCCKSNEVHNPIVSSRREEGTNKALVILAKTALYDTLHHCDVCKF
YREGIASAVSRTYDYNLTSPGLQESVALKIVVPPIHSKYFDVDEETNTVQ
RLILPTTDLAQQTVTPEISVHMVKSPILMMSTVGEEEGLLNLFHGMEETD
HIHVTFIQYSEVAAYQKQWPNHIFVGLPDSFSKASDSAVKNIMKTFASQN
YNSNEEKRSADGKGGTTWPFVLFVPDNVVMWQKYWKEECYSSDSDEETTE
KKERHSNGSVRDSITRDTASLLEFLTSVESNEKLLQHAVIGIRPWSSFQD
EAGIPICVRTFFEDCFLLDVNKTQQIQYSPHVYSGENLDFHLKVLDEKLP
TCRFEHFTFMLKVTSNSKWRTRNGSVLGIEPLSSQDVTRFVCQPDVDTLT
PLEANPHHVFQKYLKYTGSTIFPFSVQKPDNPVLVIGGYLNLGPQIDVCV
LNNGDFQDKIMNTCCYSSTEFSGLIIYNCSRKLSKDCFSAIKFVKKSKLI
FVCEERAELRNEAIRLDLEEDWRFRLRDEYQTATKPVEGLKALHFLTGTK
IF
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_009751XLOC_009751Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00017405TCONS_00017405Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR028422GREB1
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR028422GREB1PFAMPF15782GREB1coord: 170..303
e-value: 3.9E-53
score: 180.1
coord: 517..1163
e-value: 2.0E-100
score: 336.9
coord: 1358..2001
e-value: 1.5E-111
score: 373.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 329..365
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 378..397
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1304..1368

Blast
BLAST of TCONS_00017405-protein vs. Swiss-Prot (Human)
Match: GRB1L (GREB1-like protein OS=Homo sapiens GN=GREB1L PE=2 SV=2)

HSP 1 Score: 301.212 bits (770), Expect = 3.623e-82
Identity = 219/780 (28.08%), Postives = 358/780 (45.90%), Query Frame = 0
Query: 1241 PIVLISKPLWLMLNSDQ-GDTRGLVHLNSDPNTRWFRSSRPLL---MTSKPDRISRYYRRWTEPRPARKMVTTPAAPSTMPSPGGSFIDDDCDTQSHNEVDQILASPPKRQPIERRDSEQIDHEDKDNEDSDKAQYHPRCFLFSGPPQAGKTGSYLYFAYLLHRMLMRLKRVDVYDNCVTYTPS------TFDDKETCADVDVIANWQFLSKFLDMRREKFSRIHVCCKSNEVHNPIVSSRREEGTNKALV--ILAKTALYDTLHHCDVCKFYREGIASAV---SRTYDYNLTSPGLQESVALKIVVPPIHSKYFDVDEETNTVQRLILPTTDLAQQTVTPEISVHMVKSPILMMSTVGEEEGLLNLFHGMEETDHIHVTFIQYSEVAAYQKQWPNHIFVGLPDSFSKASDSAVKNIMKTFASQNYNSNEEKRSADG-KGGTTWPFVLFVPDNVVMWQKYWKEECYSSDSDEETTEKKERHSNGSVRDSITRDTASLLEFLTSVESNEKLLQHAVIGIRPWSS-FQDEAGIPICVRTFFEDCFLLDVNKTQQIQYSPHVYSGENLDFHLKVLDEKLPTCRFEHFTFMLKVTSNSKWR--TRNGSVLGIEPLSSQDVTRFVCQPDVDTLTPLEANPHHVFQKYLKYTGSTIFPFSVQKPDNPVLVIGGYLNLGPQIDVCVLNNGDFQDKIMNTCCYSSTEFSGLIIYNCSRKLSKDCFSAIKFVKKSKLIFVCEERAELRNEAIRLDLEEDWRFRLRDEYQTATKPVEGLKALHFLTGTKI 2001
            P+V++SK  + +L S + G       L    +  W  S RPLL   M+S+    S YYR+WT  R                             Q H                        D+ ++ +  S    +HPR  L +GPPQ GKTGSYL F  +L RML+RL  VDVYD     T        +  + E   D++  +   F     D +    S ++    +      I  S+ EE   +  V  +L K A Y+T HHC+ C+ Y +  +++    S  + +  +S  L E V L  ++P     +F   ++   ++ + LP        +  + +++ VKSPI   S+   E GLLNLFH ME   H+H+  ++  E+  Y+K WPNHI + LP  F+ A   A + ++K  +  N      +    G K    WPF++ + D+ V+W  +  +E                 S+  +   ++    SL   L  +E+  K++ +A++GI+ WSS    ++      R    D  LL+ + TQ +QY  + Y  E+ DF+L+     L  CRF +F+ M K       R       ++  E L+     +++C PD +  T L A    + +K+L++    +FP ++    +PVL I  YLN+GP++ +C +++   +    N  C     FSGL++Y C   +  D     KF+K + L  +C++R+ LR   +RL+LE++W+FRLRDE+QTA    +  K L+FLTG  +
Sbjct: 1230 PVVILSKAAYSLLGSQKSGKLPSSSSLLPHADVAWVSSLRPLLNKDMSSEEQ--SLYYRQWTLAR-----------------------------QHH-----------------------ADYSNQLDPASGTRNFHPRRLLLTGPPQVGKTGSYLQFLRILFRMLIRLLEVDVYDEEEINTDHNESSEVSQSEGEPWPDIESFSKMPFDVSVHDPKYSLMSLVYTEKLAGVKQEVIKESKVEEPRKRETVSIMLTKYAAYNTFHHCEQCRQYMDFTSASQMSDSTLHAFTFSSSMLGEEVQLYFIIPKSKESHFVFSKQGKHLESMRLP--------LVSDKNLNAVKSPIFTPSSGRHEHGLLNLFHAMEGISHLHLLVVKEYEMPLYRKYWPNHIMLVLPGMFNNAGVGAARFLIKELSYHNLELERNRLEELGIKRQCVWPFIVMMDDSCVLWNIHSVQE----------------PSSQPMEVGVSSKNVSLKTVLQHIEATPKIVHYAILGIQKWSSKLTSQSLKAPFSRCHVHDFILLNTDLTQNVQYDFNRYFCEDADFNLRTNSSGLLICRFNNFSLMKKHVQVGGQRDFIIKPKIMVSESLAPILPLQYICAPDSEH-TLLAAPAQFLLEKFLQHASYKLFPKAIHNFRSPVLAIDCYLNIGPEVAICYISS---RPHSSNVNC-EGVFFSGLLLYLCDSFVGAD-LKKFKFLKGATLCVICQDRSSLRQTIVRLELEDEWQFRLRDEFQTANSSDD--KPLYFLTGRHV 1923          

HSP 2 Score: 282.722 bits (722), Expect = 1.807e-76
Identity = 220/781 (28.17%), Postives = 370/781 (47.38%), Query Frame = 0
Query:  416 GVRPVLLLCHEISKKLPNSVDDLVVSDLLVGCFDFPDTLIPSVLEETSIDYPLDPAADKLREQTAANTLINMGSGTQPPVNKNHFDGKSWPSVSARLKEAATTTLPLNAAIILFTQYLINLDESGIN-KENIELVLNKARIEMSTSTINSLFIQSQSVASTHAQLSLMINLQCSASNGKVRVMTSTISFQNALYKALQWLNETFYVSKVANKKMKTPDFVIILSTPPEGPVEFAVLVTGVSHAKILAESLRIDSVVCKDF-----TESLKKLRAQFSQTDTA--LNRLIKVHERNQGEKVFYPFNEFPGKKLSIEEAEVMHPKQ-APLSAKPYHTKGVFANQAAMAHQLLKQLRNVAEN-PDILDLASFLHVDICIVVPPVASLYYMTVKRLCESGVLNFLGLEQLDVTGNHKLGEKYVITYDDWPASIEKWTKFVNNIQSRNDTLHLLIFDQAQ-----------RFSLP-QGMPDILPNLKEVFESVNVIPVFVTSVPYMFQTNKSFIDPDNEIYWTDTQQGSAFSKYTDDERVMINDQDMLYFGVKELCDSTRWNQQFSLIRTEETLDWA----LPKANRLNDINYSIVQGYVLLRLYQASLMVGAGVKPAEPYAVMSFITMVNDIIEAPLHNTDGSGSMLMIRIPNRQLSKHFHDVLLKTRNSLGLQYRFDVIHDDGDSELEIGEHFLARMRRWKIMRGWKEEHVKNWKPKCLEELLDLPCFLILSGEDRSGETLPRSLKYADFNILNQSKFHRSTIEAEIGMCSCYL---MINGGT 1167
            GVRPV+L+ +        +V D+VVS LLV C+  P       LE   ++                                             +L    +  L +   I+L  QYL+ L    +  +E  E ++ KA  E +     +L I +Q V  +  QL  +  L  S S   V V+ +  S    + + L+ L+E  +  ++       PD+V+++        EF V+V G   ++ LAES+   S   K+      T  +  L + F  T     L++L++  ++ +G+ V  PF+    + +S +EA  M P Q   L  + +H   ++  Q  +A +LL Q+  +A++    LDL  F  VD  I+VP    L   T++R+ +SGVL  LGLE+      H+  EKYV+  D+   +  K+  F+  ++    TL +L+ D +              S P  G+ D + N +EV E+ N++ + V+S PY  QT +S I   NE++W     G             +  ++ LYFG+ E   S +W     L+R +ET +      L +  RL+ +   +V+ Y+L++ Y  +LM    +     ++    +++++D+I +P  N  G G ML+IR+P+ QL+    + L + R+ LGLQYRF++I  +  +EL +  HF+AR++ W   RG + E    W P+  ++L  LPC +IL+G+D  GET PRSLKY D  +++ S   R+ +E E+G+  CY+   +I G T
Sbjct:  395 GVRPVILIGYGTLPYFYGNVGDIVVSPLLVNCYKIPQ------LENKDLE---------------------------------------------KLGLTGSQFLSVENMILLTIQYLVRLGPDQVPLREEFEQIMLKAMQEFTLRE-RALQIGAQCVPVSPGQLPWLARLIASVSQDLVHVVVTQNSLAEGISETLRTLSEMRHYQRL-------PDYVVVICASKIRGNEFCVVVLGQHQSRALAESMLTTSEFLKEISYELITGKVSFLASHFKTTSLGDDLDKLLEKMQQRRGDSVVTPFDGDLNECVSPQEAAAMIPTQNLDLDNETFH---IYQPQLTVARKLLSQVCAIADSGSQSLDLGHFSKVDFIIIVPRSEVLVQQTLQRIRQSGVLVDLGLEENGTA--HQRAEKYVVRLDNEIQT--KFEVFMRRVKQNPYTLFVLVHDNSHVELTSVISGSLSHSEPSHGLADRVINCREVLEAFNLLVLQVSSFPYTLQTQQSRISSSNEVHWIQLDTGED-----------VGCEEKLYFGLSEYSKSLQWGITSPLLRCDETFEKMVNTLLERYPRLHSM---VVRCYLLIQQYSEALMALTTMASLRDHSTPETLSIMDDLISSPGKNKSGRGHMLIIRVPSVQLAMLAKERLQEVRDKLGLQYRFEIILGNPATELSVATHFVARLKSW---RGNEPE---EWIPRTYQDLDGLPCIVILTGKDPLGETFPRSLKYCDLRLIDSSYLTRTALEQEVGLACCYVSKEVIRGPT 1089          

HSP 3 Score: 147.902 bits (372), Expect = 2.763e-35
Identity = 71/128 (55.47%), Postives = 87/128 (67.97%), Query Frame = 0
Query:  171 GKCQSGGELRLTELSHKLNNLHVPEGFVLVGAKSPMLTGMMLVAAVDKRYLPGEKDTLTTPGFSGNCVGCGATGFRYFTEFSTHINLKLATQPKKQKHLKCYITQAVDGKWGKGHLIPWKGTETKKRS 298
            G CQ+G +LRL  L   +  + +P GF+LVGAKSP L   +LV AVDKR+LP +       GFSGNC+GCG  GFRYFTEFS HINLKL TQPKKQKHLK Y+ ++  G   KG LI WK   +++ S
Sbjct:  119 GFCQAGKDLRLVSLC--MEQIDIPAGFLLVGAKSPNLPEHILVCAVDKRFLPDDHGKNALLGFSGNCIGCGERGFRYFTEFSNHINLKLTTQPKKQKHLKYYLVRSSQGVLSKGPLICWKECRSRQSS 244          
The following BLAST results are available for this feature:
BLAST of TCONS_00017405-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
GRB1L3.623e-8228.08GREB1-like protein OS=Homo sapiens GN=GREB1L PE=2 ... [more]
back to top