TCONS_00016553-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00016553-protein
Unique NameTCONS_00016553-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length902

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00016553-protein ID=TCONS_00016553-protein|Name=TCONS_00016553-protein|organism=Clytia hemisphaerica|type=polypeptide|length=902bp
HRHFLLLSSFRFLHDCFNSKIIHKMPSNVKVRDLIRSIRAARTAADEREV
ITKECALIRTSFREEDNDARSRNVAKLLYIHMLGYPAHFGQLECLKLIAS
QKFNDKRMGYLGAMMLLDEKQDVHLLVTNCLKNDLNHTSQYVQGLALCTL
GSICSAEMSRDLAGEVERLMKAGNSYIKKKACLCAVRVIRKVPELTEMFV
SLTRSLMSDNNHGVQLTAIVLISEMCILSPDVVSHFRRYVPNLVRSLKSL
IQAGYSPEHDVNGISDPFLQVHILRLLRLLGHKDMDSSETMNDLLAQVAT
NTETTKNVGNSVLYETVLTIMDIKSESGLRVLGINILGRFLLNNDKNIRY
VALNTLLKTLNIDNSAVQRHRSTVLECLKDPDISIRRRAIELSFALVNTS
NIRSMMKELIFFLENCDVEFKQYTASNIITVAEKFAPNKRWHIDTILKVL
TTASLYVRDDLVSTLIQLISGTDTLHTYTVQQLFRAIQDDKTQQSLVQMA
SWCIGEYGELLLSTDLEEDEPLDVTESDVVALLDGILGSTLSSPVTKEYA
LTAVMKLTTRFTTCNDQIQLVINNYTTNTDVELQQRSVEYDAIFRKYEPL
RPGLLERMPLISTDPSPADGAKELNGDASLSEITKLDTSTTGGQQQKESD
SLFDLLGDGLPSAQTSPAPAVSGGSTSGGGLMDLLGDLDMGAGAAPVMPQ
QPVMSTGMSSGGGSSGLDDLLGLGGGPSXAGAAPVMPQQPVMSTGMSSGG
GSSGLDDLLGLGGGPSTNDLMSAPAPQPPTSEFPTITAFEKNGLKINFSF
GDVGSQGPGTFITKMTATNSQASTMENFLFQAAVPKTFKLQMQSPSGNTL
ASMNTGTVTQAMLVGNPNKEPVRMLLRISYTLNGQNVQEQGQVDSFPSQL
WS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_009249XLOC_009249Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00016553TCONS_00016553Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008152Clathrin_a/b/g-adaptin_app_Ig
IPR017107AP1_complex_gsu
IPR011989ARM-like
IPR002553Clathrin/coatomer_adapt-like_N
IPR008153GAE_dom
IPR013041Coatomer/clathrin_app_Ig-like
IPR016024ARM-type_fold
Vocabulary: Biological Process
TermDefinition
GO:0016192vesicle-mediated transport
GO:0006886intracellular protein transport
GO:0015031protein transport
Vocabulary: Cellular Component
TermDefinition
GO:0030131clathrin adaptor complex
GO:0005794Golgi apparatus
GO:0030117membrane coat
Vocabulary: Molecular Function
TermDefinition
GO:0008565protein transporter activity
GO:0005488binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006886 intracellular protein transport
biological_process GO:0015031 protein transport
biological_process GO:0016192 vesicle-mediated transport
cellular_component GO:0030131 clathrin adaptor complex
cellular_component GO:0005794 Golgi apparatus
cellular_component GO:0030117 membrane coat
molecular_function GO:0005488 binding
molecular_function GO:0008565 protein transporter activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008152Clathrin adaptor, alpha/beta/gamma-adaptin, appendage, Ig-like subdomainSMARTSM00809alpha_adaptinc2coord: 778..897
e-value: 2.5E-36
score: 136.7
IPR008152Clathrin adaptor, alpha/beta/gamma-adaptin, appendage, Ig-like subdomainPFAMPF02883Alpha_adaptinC2coord: 785..897
e-value: 2.0E-28
score: 98.8
IPR017107Adaptor protein complex AP-1, gamma subunitPIRSFPIRSF037094AP1_gammacoord: 27..900
e-value: 0.0
score: 1100.2
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 21..614
e-value: 1.2E-134
score: 449.4
IPR002553Clathrin/coatomer adaptor, adaptin-like, N-terminalPFAMPF01602Adaptin_Ncoord: 47..596
e-value: 5.3E-139
score: 464.0
NoneNo IPR availableGENE3D2.60.40.1230coord: 780..902
e-value: 7.0E-42
score: 142.0
IPR008153Gamma-adaptin ear (GAE) domainPROSITEPS50180GAEcoord: 781..897
score: 49.138
IPR013041Coatomer/clathrin adaptor appendage, Ig-like subdomainSUPERFAMILY49348Clathrin adaptor appendage domaincoord: 773..901
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 46..611

Blast
[Close]
BLAST of TCONS_00016553-protein vs. Swiss-Prot (Human)
Match: AP1G1 (AP-1 complex subunit gamma-1 OS=Homo sapiens GN=AP1G1 PE=1 SV=5)

HSP 1 Score: 976.852 bits (2524), Expect = 0.000e+0
Identity = 490/881 (55.62%), Postives = 643/881 (72.99%), Query Frame = 0 
Query:   25 MPSNVKVRDLIRSIRAARTAADEREVITKECALIRTSFREEDNDARSRNVAKLLYIHMLGYPAHFGQLECLKLIASQKFNDKRMGYLGAMMLLDEKQDVHLLVTNCLKNDLNHTSQYVQGLALCTLGSICSAEMSRDLAGEVERLMKAGNSYIKKKACLCAVRVIRKVPELTEMFVSLTRSLMSDNNHGVQLTAIVLISEMCILSPDVVSHFRRYVPNLVRSLKSLIQAGYSPEHDVNGISDPFLQVHILRLLRLLGHKDMDSSETMNDLLAQVATNTETTKNVGNSVLYETVLTIMDIKSESGLRVLGINILGRFLLNNDKNIRYVALNTLLKTLNIDNSAVQRHRSTVLECLKDPDISIRRRAIELSFALVNTSNIRSMMKELIFFLENCDVEFKQYTASNIITVAEKFAPNKRWHIDTILKVLTTASLYVRDDLVSTLIQLISGTDTLHTYTVQQLFRAIQDDKTQQSLVQMASWCIGEYGELLLSTDLEEDEPLDVTESDVVALLDGILGSTLSSPVTKEYALTAVMKLTTRFTTCNDQIQLVINNYTTNTDVELQQRSVEYDAIFRKYEPLRPGLLERMPLISTDPSPADGAKELNGDASLSEITKLDTST--TGGQQQKESDSLFDLLG--DGLPSAQTSPAPAVSGGSTSGGGLMDLLGDLDMGAGAAPVMPQQPVMSTGMSSGGGSSGLDDLLGLGGGPSXAGAAPVMPQQPVMSTGMSSGGGSSGLDDLLGLGGGPSTNDLMSAPAPQPPTSEFPTITAFEKNGLKINFSFGDVGSQGPGTFITKMTATNSQASTMENFLFQAAVPKTFKLQMQSPSGNTLASMNTGTVTQAMLVGNPNKEPVRMLLRISYTLNGQNVQEQGQVDSFPSQLW 901
            MP+ +++R+LIR+IR ART A+ERE+I KECA IR+SFREEDN  R RNVAKLLY+HMLGYPAHFGQLECLKLIASQKF DKR+GYLGAM+LLDE+QDVHLL+TNC+KNDLNH++Q+VQGLALCTLG + S+EM RDLAGEVE+L+K  NSY++KKA LCAV VIRKVPEL EMF+  T++L+++ NHGV  T++VL++EMC  SPD+++HFR+ VP LVR LK+LI +GYSPEHDV+GISDPFLQV ILRLLR+LG  D DSSE MND+LAQVATNTET+KNVGN++LYETVLTIMDIKSESGLRVL INILGRFLLNNDKNIRYVAL +LLKT+  D++AVQRHRST+++CLKD D+SI+RRA+ELSFALVN +NIR MMKEL++FL++C+ EFK   AS I   AEK+AP+KRWHIDTI++VLTTA  YVRDD V  LIQLI+ +  +H YTVQ+L++AI  D +QQ LVQ+A+WCIGEYG+LL+S   EE+EP+ VTE +V+ +L+ +L S +S+ VT+ YALTA+MKL+TRFT   ++I+ V++ Y ++ DVELQQR+VEY+A+F+KY+ +R  LLERMP++  +    +G  E+      +E   L+T    +G Q   +++ L DLLG  D  P   T+P    S  S++GG L+DLLGD++                              L G         + P + Q P +  G+SS                P  ND+ +           P+ITA+ KNGLKI F+F +  +  P   +  + A+NS    M +F+FQAAVPKTF+LQ+ SPS + + + NTGT+TQ + V NP K+ +RM ++++Y   G  +Q+  +V++FP Q W
Sbjct:    1 MPAPIRLRELIRTIRTARTQAEEREMIQKECAAIRSSFREEDNTYRCRNVAKLLYMHMLGYPAHFGQLECLKLIASQKFTDKRIGYLGAMLLLDERQDVHLLMTNCIKNDLNHSTQFVQGLALCTLGCMGSSEMCRDLAGEVEKLLKTSNSYLRKKAALCAVHVIRKVPELMEMFLPATKNLLNEKNHGVLHTSVVLLTEMCERSPDMLAHFRKLVPQLVRILKNLIMSGYSPEHDVSGISDPFLQVRILRLLRILGRNDDDSSEAMNDILAQVATNTETSKNVGNAILYETVLTIMDIKSESGLRVLAINILGRFLLNNDKNIRYVALTSLLKTVQTDHNAVQRHRSTIVDCLKDLDVSIKRRAMELSFALVNGNNIRGMMKELLYFLDSCEPEFKADCASGIFLAAEKYAPSKRWHIDTIMRVLTTAGSYVRDDAVPNLIQLITNSVEMHAYTVQRLYKAILGDYSQQPLVQVAAWCIGEYGDLLVSGQCEEEEPIQVTEDEVLDILESVLISNMSTSVTRGYALTAIMKLSTRFTCTVNRIKKVVSIYGSSIDVELQQRAVEYNALFKKYDHMRSALLERMPVM--EKVTTNGPTEIVQTNGETEPAPLETKPPPSGPQPTSQANDLLDLLGGNDITPVIPTAPT---SKPSSAGGELLDLLGDIN------------------------------LTGAPAAAPAPASVPQISQPPFLLDGLSSQ---------------PLFNDIAAG---------IPSITAYSKNGLKIEFTF-ERSNTNPSVTVITIQASNSTELDMTDFVFQAAVPKTFQLQLLSPSSSIVPAFNTGTITQVIKVLNPQKQQLRMRIKLTYNHKGSAMQDLAEVNNFPPQSW 821
The following BLAST results are available for this feature:
BLAST of TCONS_00016553-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
AP1G10.000e+055.62AP-1 complex subunit gamma-1 OS=Homo sapiens GN=AP... [more]
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