TCONS_00014740-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00014740-protein
Unique Name	TCONS_00014740-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	433

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00014740-protein ID=TCONS_00014740-protein|Name=TCONS_00014740-protein|organism=Clytia hemisphaerica|type=polypeptide|length=433bp
MGERSVAQARASVMIYNNDLKKWEHAGGVGGLSRCHIYFNPANNSYRIVG
RKINDNDVVLNCGIGKNLRYNKATPTFHQWRDQRQVYGLNFQSADDAVVF
SEAVMAAVDDINNPSAPEPVQQYQPKVEPQRTAVPAQPPQPPQPPQAPKG
VPAPPPPPPVNNVPPSTPAPPPPAPPAPPSGGGPPPPPPPPPAPGGGGPP
APPAPPAPGGGPPPPPPPPPAPSAGGAASGGGLADALKGVTLKKRSEVKE
DRKPPPSAGNPMGDMMSALNRKLMARKKMADGDSHDGGSEKSSPAHVAKT
PVAPPAPAVKTPAAPPAPAQKSPAAAKKFTPAAPSPPSQKTTPPPFNKPT
NVVVPSNKKNETPSATNNRTTSVSTSNNQPTPSAASLNSNYSSIYDSPDM
VSLREDILTAVREEIQTAKKEIIEVLRQELSRR

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_008245	XLOC_008245	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00014740	TCONS_00014740	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000697	WH1/EVH1_dom
IPR014885	VASP_tetra
IPR011993	PH_dom-like

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 408..433
None	No IPR available	GENE3D	1.20.5.1160		coord: 396..433 e-value: 1.7E-11 score: 43.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 111..396
None	No IPR available	CDD	cd01207	EVH1_Ena_VASP-like	coord: 5..112 e-value: 1.00418E-54 score: 178.27
None	No IPR available	SUPERFAMILY	118370	Vasodilator-stimulated phosphoprotein, VASP, tetramerisation domain	coord: 396..433
IPR000697	WH1/EVH1 domain	SMART	SM00461	WH1_2	coord: 1..108 e-value: 5.6E-32 score: 122.2
IPR000697	WH1/EVH1 domain	PFAM	PF00568	WH1	coord: 5..107 e-value: 2.3E-28 score: 98.2
IPR000697	WH1/EVH1 domain	PROSITE	PS50229	WH1	coord: 1..111 score: 17.913
IPR014885	VASP tetramerisation	PFAM	PF08776	VASP_tetra	coord: 399..433 e-value: 2.5E-8 score: 33.3
IPR011993	PH domain-like	GENE3D	2.30.29.30		coord: 1..118 e-value: 1.8E-28 score: 98.6
IPR011993	PH domain-like	SUPERFAMILY	50729	PH domain-like	coord: 6..113

Blast

[Close]

BLAST of TCONS_00014740-protein vs. Swiss-Prot (Human)
Match: EVL (Ena/VASP-like protein OS=Homo sapiens GN=EVL PE=1 SV=2)

HSP 1 Score: 161.384 bits (407), Expect = 4.299e-45
Identity = 147/458 (32.10%), Postives = 210/458 (45.85%), Query Frame = 0

Query:    1 MGERSVAQARASVMIYNNDLKKWEHAG-GVGGLSRCHIYFNPANNSYRIVGRKINDNDVVLNCGIGKNLRYNKATPTFHQWRDQRQVYGLNFQSADDAVVFSEAVMAAVDDINNPSA-PEPVQQYQ-----PKVEPQRTAVPAQPPQPPQPPQAPKGVPAPPPPPPVNNVPPSTPAPPPPAPPAPPSGGGPPPPPPPPPAPGGGGPPAPPAPPAPGGGPPPPPPPPPAPSAGGAASGGGLADALKGVTLKKRSEVKEDRKPPP-------------SAGNPMGDMMSALNRKLMARKKMADGDSHDGGSEKSSPAHVAKTPVAPPAPAVKTPAAPPAPAQKSPAAAKKFTPAAPSPPSQKTTPPPFNKPTNVVVPSNKKNETPSATNNRTTSVSTS-------NNQPTPSAASLNSNYSSIYDSPDMVSLREDILTAVREEIQTAKKEIIEVLRQELS 431
            M E+S+ QARASVM+Y++  KKW     G  G SR +IY N A+N++R+VG K+ D  VV+N  I K L+YN+ATPTFHQWRD RQVYGLNF S ++A  FS A++ A++ +N+    P   +Q Q      +++ QR  V  Q  Q  Q                  ++   T A  P  PP  PS     P     P P    P  PP   A    PPP P      S+   +S  GLA A+ G  L+ R +  ED                  S+G   G +M  +N KL+A+++ A   S D  +EK       + P   P+P  +  + PP     S  A +K                P+ +  +V  P        S+  +RT SV+ S        +QP        S      D+ D+  ++++IL  V  E+   K+EII+ +RQELS
Sbjct:    1 MSEQSICQARASVMVYDDTSKKWVPIKPGQQGFSRINIYHNTASNTFRVVGVKLQDQQVVINYSIVKGLKYNQATPTFHQWRDARQVYGLNFASKEEATTFSNAMLFALNIMNSQEGGPSSQRQVQNGPSPDEMDIQRRQVMEQHQQQRQ-----------------ESLERRTSATGPILPPGHPSSAASAPVSCSGPPPPPPPPVPPPPTGATPPPPPPLPAGGAQGSSHDESSMSGLAAAIAGAKLR-RVQRPEDASGGSSPSGTSKSDANRASSGGGGGGLMEEMN-KLLAKRRKAASQS-DKPAEKKEDESQMEDPSTSPSPGTRAASQPP----NSSEAGRK----------------PWERSNSVEKP-------VSSILSRTPSVAKSPEAKSPLQSQPHSRMKPAGSVNDMALDAFDLDRMKQEILEEVVRELHKVKEEIIDAIRQELS 411

The following BLAST results are available for this feature:

BLAST of TCONS_00014740-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00014740-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
EVL	4.299e-45	32.10	Ena/VASP-like protein OS=Homo sapiens GN=EVL PE=1 ...	[more]

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TCONS_00014740-protein (polypeptide) - C. hemisphaerica