TCONS_00014199-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00014199-protein
Unique NameTCONS_00014199-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length492

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00014199-protein ID=TCONS_00014199-protein|Name=TCONS_00014199-protein|organism=Clytia hemisphaerica|type=polypeptide|length=492bp
MSVANRFRQSITKALSLTDIDDENAGQTQQNNKITSESIIAKSVNLFSKF
THSSNNSVNNIGGVRDERRQKTLLVIDGNKEHEWSRVFKGCSLHGIYDVR
VEQVALSDLEVKSSSEKGASISMRVVRNGAVIARSLRPDFVLFREYVKGG
DLKTDHTNVLLGLMHGLVPSVNSLLTTFNFLQKPVVYAELLKIRQRLGKE
NFPLIEQNYYQSYYEMLLPPSLPVVIKVGSANSGLGKVCVASPRGFQDVA
SLVSLTNTYATSESFLEGKFDLRIYKFGQRYKVYKRKSLCDAWKTNTGTS
TVEEIALTERYKNWADECAGLFDGLDILSVEVIHTKDDKEYIIEVNNIPP
SICPDKREDDMKCIANVVLKKMEKEFPPPQPPQNNAAGNTLTDAIQLISG
PPSPNIPRANENIKLKSVVMNAQTTNLRPESAPPNEMNMESRNHFKRALN
GGSVTNSNTSLNDLDKKDQSQSRQDQNRRGSLTGRFFSAFES
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_007949XLOC_007949Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00014199TCONS_00014199Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001359Synapsin
IPR020898Synapsin_ATP-bd_dom
IPR020897Synapsin_pre-ATP-grasp_dom
IPR013815ATP_grasp_subdomain_1
IPR011761ATP-grasp
IPR016185PreATP-grasp_dom
Vocabulary: Biological Process
TermDefinition
GO:0007269neurotransmitter secretion
Vocabulary: Cellular Component
TermDefinition
GO:0008021synaptic vesicle
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0005524ATP binding
GO:0046872metal ion binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007269 neurotransmitter secretion
cellular_component GO:0008021 synaptic vesicle
molecular_function GO:0005524 ATP binding
molecular_function GO:0003824 catalytic activity
molecular_function GO:0046872 metal ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001359SynapsinPRINTSPR01368SYNAPSINcoord: 274..286
score: 51.54
coord: 288..304
score: 45.29
coord: 98..110
score: 48.46
coord: 134..145
score: 71.67
coord: 307..328
score: 50.91
coord: 83..92
score: 37.0
IPR020898Synapsin, ATP-binding domainPFAMPF02750Synapsin_Ccoord: 172..373
e-value: 9.1E-66
score: 221.2
NoneNo IPR availableGENE3D3.40.50.20coord: 71..177
e-value: 3.8E-30
score: 103.6
NoneNo IPR availableGENE3D3.30.470.20coord: 253..349
e-value: 6.6E-31
score: 106.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 448..492
NoneNo IPR availableSUPERFAMILY56059Glutathione synthetase ATP-binding domain-likecoord: 172..373
IPR020897Synapsin, pre-ATP-grasp domainPFAMPF02078Synapsincoord: 69..170
e-value: 4.3E-28
score: 97.5
IPR013815ATP-grasp fold, subdomain 1GENE3D3.30.1490.20coord: 206..252
e-value: 3.7E-20
score: 70.9
IPR011761ATP-grasp foldPROSITEPS50975ATP_GRASPcoord: 194..373
score: 10.167
IPR016185Pre-ATP-grasp domainSUPERFAMILY52440PreATP-grasp domaincoord: 70..171

Blast
[Close]
BLAST of TCONS_00014199-protein vs. Swiss-Prot (Human)
Match: SYN1 (Synapsin-1 OS=Homo sapiens GN=SYN1 PE=1 SV=3)

HSP 1 Score: 296.59 bits (758), Expect = 7.660e-93
Identity = 134/305 (43.93%), Postives = 208/305 (68.20%), Query Frame = 0 
Query:   73 LLVIDGNKEHEWSRVFKGCSLHGIYDVRVEQVALSDLEVKSSSEKGASISMRVVRNGAVIARSLRPDFVLFREYVKGGDLKTDHTNVLLGLMHGLVPSVNSLLTTFNFLQKPVVYAELLKIRQRLGKENFPLIEQNYYQSYYEMLLPPSLPVVIKVGSANSGLGKVCVASPRGFQDVASLVSLTNTYATSESFLEGKFDLRIYKFGQRYKVYKRKSLCDAWKTNTGTSTVEEIALTERYKNWADECAGLFDGLDILSVEVIHTKDDKEYIIEVNNIPPSICPDKREDDMKCIANVVLKKMEKEFP 377
            LLVID     +W++ FKG  +HG  D++VEQ   SDL + + +  G S+ M V+RNG  + RSL+PDFVL R++        D+ ++++GL +  +PSVNSL + +NF  KP V+A+++++ ++LG E FPLI+Q +Y ++ EML   + PVV+K+G A+SG+GKV V +   FQD+AS+V+LT TYAT+E F++ K+D+R+ K GQ YK Y R S+   WKTNTG++ +E+IA+++RYK W D C+ +F GLDI +VE +H KD +++IIEV      +  D +++D + I  +V+ KM +  P
Sbjct:  116 LLVID-EPHTDWAKYFKGKKIHGEIDIKVEQAEFSDLNLVAHANGGFSVDMEVLRNGVKVVRSLKPDFVLIRQHAFSMARNGDYRSLVIGLQYAGIPSVNSLHSVYNFCDKPWVFAQMVRLHKKLGTEEFPLIDQTFYPNHKEMLSSTTYPVVVKMGHAHSGMGKVKVDNQHDFQDIASVVALTKTYATAEPFIDAKYDVRVQKIGQNYKAYMRTSVSGNWKTNTGSAMLEQIAMSDRYKLWVDTCSEIFGGLDICAVEALHGKDGRDHIIEVVGSSMPLIGDHQDEDKQLIVELVVNKMAQALP 419
The following BLAST results are available for this feature:
BLAST of TCONS_00014199-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SYN17.660e-9343.93Synapsin-1 OS=Homo sapiens GN=SYN1 PE=1 SV=3[more]
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