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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00013497-protein ID=TCONS_00013497-protein|Name=TCONS_00013497-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1071bp
MQHLQGLTNVCNVIECPPGYYTTENGTAHCTICPEGNKCPIPHNLPIPCS
EGEYQPEEGKDFCLPVPSGLVVTDGKTPKECQAGEYSNGTACVECPKGFY
CPSSTTTPIVCKAGTYANALSSTSCQLCPSGYSCLNAADAPVACTAGSYS
VAGQIKCTTCPTGQFSYNTASSCSPCPGGSYCTNGTAPIVPPLPCAFGFY
SVVGQGQCKECPQHTYTPGFGAQFCTPCPVGSTCDDPTAIPIPCSDGTYW
SNADETPKCIACPAGYSCEDAKVPPVPCKKGFYSTGGNSTCLPCPEGYSC
LDSTQPVSCKIGEYSLSGVEYCTPCPPGFSCPTPNQAAGPCPAGTYSLKG
EGTCNNCSAGFMCPSTSHAPIQCRVGQTANGLQNQVNCTNCLAGFACPTA
ASPMEECSAGYYSFSGATKCTYCPAGYQCPTRNSRPTICTQGTFSVGGQT
TCHQCSAGFSCESIYSNSSKPCPGGTYAAAGSYKCTPCPQGSSCPDPTVS
NAVSCDHGSFAVGTQTTCTVCPPGWECPKTDASENKQCQFGYYSKGNATS
CTLCPAGFECRRTDISEPVACKPGTFSTGGQVKCTRCPSGSSCPDLDKAT
ITPCPSGSYSLSGEATCTECPPGYACPSLFEPLILACPRGTYSVGAKSEC
TPCPAGEECKNNTQVGVACSDGYYSLEGSYSCTPCPAGYYCPVKNDRPRI
CEAGKYNDPMRTTCLDCNAGYVCVEGSTKATPEIGLCPLGSYCEDKINAI
KCPSGTYGQKTGGISESDACKACPEGYYCEAGTPGFPKHSVRCPPGHFCL
EGTKTASQHPCPNGFFNTEIGAVRQDQCKECLPGYYCSGGDPTGDSLCPT
GHYCPQKTESSTQYPCSAGYYTEEKGATTATDCKVCPAGYYCLEGSDSPT
ACPPGTYNPVPMQGAASNCRQCEAGFACPLSASTQPTEQCSAGYYCPEGS
SSPSDPLNACPAGTYTDYHNLTADSQCDGCPAGQACSAGTGGNQKPPQPC
AAGYYCLPRTRHPKQHPCPAGSYSNLTNLHKWTDCTECPKGQYCLEGAAA
PSGICPTGHYCPPGMLLVCLR Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005576 | extracellular region |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006030 | chitin metabolic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008061 | chitin binding |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0006030 |
chitin metabolic process |
| cellular_component |
GO:0005576 |
extracellular region |
| molecular_function |
GO:0008061 |
chitin binding |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR011641 | Tyrosine-protein kinase ephrin type A/B receptor-like | SMART | SM01411 | GCC2_GCC3_2 | coord: 943..1000
e-value: 2.8
score: 12.9
coord: 198..244
e-value: 2.8E-8
score: 43.5
coord: 796..883
e-value: 0.0089
score: 25.2
coord: 442..488
e-value: 0.6
score: 19.0
coord: 1003..1055
e-value: 0.0058
score: 25.8
coord: 541..587
e-value: 1.4
score: 15.5
coord: 740..793
e-value: 1.4
score: 15.6
coord: 6..49
e-value: 2.0
score: 14.2
coord: 394..439
e-value: 3.7
score: 11.8
coord: 147..195
e-value: 0.16
score: 21.1
coord: 889..939
e-value: 6.5E-5
score: 32.3
coord: 590..637
e-value: 1.1
score: 16.5
coord: 640..685
e-value: 1.5
score: 15.4
coord: 312..373
e-value: 2.2
score: 14.0
coord: 265..309
e-value: 0.0065
score: 25.7
coord: 98..144
e-value: 5.5E-5
score: 32.6
coord: 491..538
e-value: 2.3
score: 13.8
coord: 52..95
e-value: 55.0
score: 1.3
coord: 688..737
e-value: 0.14
score: 21.2 |
| IPR011641 | Tyrosine-protein kinase ephrin type A/B receptor-like | PFAM | PF07699 | Ephrin_rec_like | coord: 198..239
e-value: 1.8E-6
score: 27.5 |
| None | No IPR available | GENE3D | 2.10.50.10 | | coord: 943..963
e-value: 0.22
score: 11.1 |
| None | No IPR available | GENE3D | 2.10.50.10 | | coord: 544..568
e-value: 0.001
score: 18.6 |
| None | No IPR available | GENE3D | 2.10.50.10 | | coord: 737..800
e-value: 1.3E-11
score: 44.2
coord: 358..423
e-value: 3.4E-9
score: 36.4
coord: 262..299
e-value: 3.9E-8
score: 33.0
coord: 569..620
e-value: 1.7E-11
score: 43.8
coord: 4..38
e-value: 0.005
score: 16.7
coord: 300..357
e-value: 1.3E-9
score: 37.8
coord: 195..259
e-value: 1.3E-10
score: 41.0
coord: 801..854
e-value: 2.9E-12
score: 46.3
coord: 893..942
e-value: 4.4E-16
score: 58.5
coord: 855..892
e-value: 3.0E-9
score: 36.6
coord: 87..136
e-value: 3.5E-11
score: 42.8
coord: 39..86
e-value: 1.9E-7
score: 30.8
coord: 678..733
e-value: 3.3E-12
score: 46.1
coord: 137..191
e-value: 1.2E-9
score: 37.9
coord: 424..480
e-value: 5.9E-11
score: 42.1
coord: 481..543
e-value: 2.5E-7
score: 30.5
coord: 1008..1066
e-value: 2.4E-12
score: 46.5
coord: 621..677
e-value: 2.9E-10
score: 39.8
coord: 964..1007
e-value: 5.0E-6
score: 26.3 |
| IPR002557 | Chitin binding domain | PROSITE | PS50940 | CHIT_BIND_II | coord: 78..136
score: 6.188 |
| IPR002557 | Chitin binding domain | PROSITE | PS50940 | CHIT_BIND_II | coord: 720..770
score: 5.884 |
| IPR002557 | Chitin binding domain | PROSITE | PS50940 | CHIT_BIND_II | coord: 776..839
score: 7.051 |
| IPR002557 | Chitin binding domain | PROSITE | PS50940 | CHIT_BIND_II | coord: 601..661
score: 6.125 |
| IPR002557 | Chitin binding domain | PROSITE | PS50940 | CHIT_BIND_II | coord: 925..988
score: 7.507 |
| IPR009030 | Growth factor receptor cysteine-rich domain | SUPERFAMILY | 57184 | Growth factor receptor domain | coord: 407..557 |
| IPR009030 | Growth factor receptor cysteine-rich domain | SUPERFAMILY | 57184 | Growth factor receptor domain | coord: 701..861 |
| IPR009030 | Growth factor receptor cysteine-rich domain | SUPERFAMILY | 57184 | Growth factor receptor domain | coord: 143..297 |
| IPR009030 | Growth factor receptor cysteine-rich domain | SUPERFAMILY | 57184 | Growth factor receptor domain | coord: 61..186 |
| IPR009030 | Growth factor receptor cysteine-rich domain | SUPERFAMILY | 57184 | Growth factor receptor domain | coord: 536..702 |
| IPR009030 | Growth factor receptor cysteine-rich domain | SUPERFAMILY | 57184 | Growth factor receptor domain | coord: 916..1070 |
| IPR009030 | Growth factor receptor cysteine-rich domain | SUPERFAMILY | 57184 | Growth factor receptor domain | coord: 809..947 |
Blast
The following BLAST results are available for this feature:
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