TCONS_00013400-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00013400-protein
Unique NameTCONS_00013400-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length181

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00013400-protein ID=TCONS_00013400-protein|Name=TCONS_00013400-protein|organism=Clytia hemisphaerica|type=polypeptide|length=181bp
MNFLQELLFLIIAYKLFPVVQTVIDDGVSLADKTTYAHNKVRYLHAVQDM
VWDQELADNSKAWADLLASENSLHHSEGSKMGMYGENLYKGFDGFKNEKT
VADAVYNWYIEIEGYNFNDPAPDLDIHGHFTALVWRTTIRVGCAITSREL
YGGLFTFIVCQYLPSGNVNGFFLSNVMQLRF
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_007487XLOC_007487Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00013400TCONS_00013400Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002413V5_allergen
IPR001283Allrgn_V5/Tpx1
IPR014044CAP_domain
IPR018244Allrgn_V5/Tpx1_CS
Vocabulary: Cellular Component
TermDefinition
GO:0005576extracellular region
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005576 extracellular region
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002413Ves allergenPRINTSPR00838V5ALLERGENcoord: 126..145
score: 40.94
coord: 50..68
score: 36.84
coord: 102..117
score: 25.0
IPR001283Cysteine-rich secretory protein, allergen V5/Tpx-1-relatedPRINTSPR00837V5TPXLIKEcoord: 50..68
score: 29.86
coord: 127..143
score: 48.11
coord: 157..170
score: 50.15
coord: 104..117
score: 32.86
IPR014044CAP domainSMARTSM00198SCP_3coord: 29..170
e-value: 5.9E-25
score: 98.9
IPR014044CAP domainPFAMPF00188CAPcoord: 36..162
e-value: 3.3E-18
score: 66.6
IPR014044CAP domainGENE3D3.40.33.10coord: 21..176
e-value: 6.6E-34
score: 116.8
IPR014044CAP domainSUPERFAMILY55797PR-1-likecoord: 33..176
IPR018244Allergen V5/Tpx-1-related, conserved sitePROSITEPS01010CRISP_2coord: 157..168
IPR018244Allergen V5/Tpx-1-related, conserved sitePROSITEPS01009CRISP_1coord: 128..138

Blast
[Close]
BLAST of TCONS_00013400-protein vs. Swiss-Prot (Human)
Match: GAPR1 (Golgi-associated plant pathogenesis-related protein 1 OS=Homo sapiens GN=GLIPR2 PE=1 SV=3)

HSP 1 Score: 81.6481 bits (200), Expect = 4.545e-20
Identity = 54/147 (36.73%), Postives = 76/147 (51.70%), Query Frame = 0 
Query:   37 AHNKVRYLHAVQDMVWDQELADNSKAWADLLASENSLHHSEGSKMGMYGENL-YKGFDGFKNEKTVADAVYNWYIEIEGYNFNDPAPDLDIHGHFTALVWRTTIRVGCAITSRELYGGLFTFIVCQYLPSGNV--NGFFLSNVMQLR 180
            AHN+ R  H V  +   + L   ++ +++ LAS   L HS  S  G  GENL +  +D  +  K VAD    WY EI+ YNF  P       GHFTA+VW+ T ++G    S        +F+V +Y P+GNV   GFF  NV+  +
Sbjct:   16 AHNEYRQKHGVPPLKLCKNLNREAQQYSEALASTRILKHSPESSRGQCGENLAWASYD--QTGKEVAD---RWYSEIKNYNFQQPGFTSGT-GHFTAMVWKNTKKMGVGKAS---ASDGSSFVVARYFPAGNVVNEGFFEENVLPPK 153
The following BLAST results are available for this feature:
BLAST of TCONS_00013400-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
GAPR14.545e-2036.73Golgi-associated plant pathogenesis-related protei... [more]
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