TCONS_00012741-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00012741-protein
Unique NameTCONS_00012741-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1006

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00012741-protein ID=TCONS_00012741-protein|Name=TCONS_00012741-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1006bp
MMVAGLRFSLIVYITAAFYLHFVAGNCKRTIFIDDDESPDDCTQKGSSFT
CGSLHAAFGVVKDGDCISLTNTTTLQSPIQKDNIKNVTIFSRTENTNVFC
SNQSGLIFSKSSHVIFENITFNDCGMISSIDWNQGLLNISSAIAFIQCDN
VNIKSTHLSLSAGYGFAFVDSNVFLRESSVVKSAFVNVSHENEYYAIGGG
VLITFQSSFKGSNQEINIESSLFKDNFNTAKTSLGSSMYDDLPFGRGAGV
YFLSGPNTENNAFIANNVIVSGNEANIGAGIYISFAENTKNNSFSFINCQ
IKNNHAQTAAGGALGLTSSEIRNHIHFKNSIFSNNTAQIGGGIAFVWPDT
YDDAKQIGIFMLENITVDSNQAKVGGAFHFQNVFVVLQNVKIVNTNNIDL
PGKGSFYALRSELRFIGNDNIIYNNRGSAIVIDNSQMTANGSIVFRQNFG
DTGGALALYEHSRLILTQNSQLLFENNTAYMEGGAIYAPTAGPPMRPWNT
TELNIYECFIKFDGISYLNFQGNVTFQNNDCNDGDSDDIFISSVQPCRHF
NENQTQVFSSWPNFHFPSEKSSIASNAICMWTLKRNEWYSYPGKLLNPHI
VLQDDRGNNVSESMDVKIYPKGEVVIDTNNAFVTSDKDSIKLQLKQKTKD
PIAFNITVKTTSNLFLEQNLTNLHFKGCPFGYTFDQHTGMCECDIMNNQN
LNIAFCDSEYIFLQKNVWVNPSQTKTYTCPNEYCHNDEGRFNHYNNDWQC
AQYRQQNSTLCSKCKVGFSAVSGSYDCQECPKNSKGWIGITAILFFTLLL
FVLLVFALGVDIMSYNLNICIYSYEVIGSLYTSEQTIDVILSFVMSIFQV
SDRNSIYPTMCLWYGMTALGKMSMGFIVPIVMLFWMAVLYVICIKFKQEI
FINNTQYNLKDRCYKTMSIIVVMCFSDLLRISIQILHYIQIDGTKYVYMY
ADEKWFGPKHQPHAIVAAIVILFLVLFSIAQIVLLRKSNVTVFVWLRKFE
DNSSVS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_007144XLOC_007144Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00012741TCONS_00012741Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012334Pectin_lyas_fold
IPR003368POMP_repeat
IPR011050Pectin_lyase_fold/virulence
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012334Pectin lyase foldGENE3D2.160.20.10coord: 26..412
e-value: 8.6E-11
score: 40.9
IPR003368Polymorphic outer membrane protein repeatTIGRFAMTIGR01376TIGR01376coord: 469..489
e-value: 6.2E-4
score: 17.5
IPR011050Pectin lyase fold/virulence factorSUPERFAMILY51126Pectin lyase-likecoord: 244..416
coord: 19..191

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00012741-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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