TCONS_00012559-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00012559-protein
Unique NameTCONS_00012559-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1351

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00012559-protein ID=TCONS_00012559-protein|Name=TCONS_00012559-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1351bp
MNFFRRKKKPEDVQKSQNEHLLNELCTVLKTHGEAILRGKTKLTLTTPIL
ATLNFYFQKITEGVNEACFQVANNEQEKDANVLQTVLFIFDFIQKVLSLK
LTSGKVATQCPLLTLEYFKALQILEISRVNIFTIKGLHLIRRQIKSLKCF
HATYAINDIVLAFGRNGEDYQTIPLLETLDISYNQVTKLSDDAFKLLPSL
INLDASFNSIENADTQSIPAVSVINLGYNMIHNIPIFSESTYQSLTKLII
RNNNLTSLEGLENFVSLIYLDVTANCIVDFKNISQLAALEKLCVILMMEN
PVSYNEGYRLRVIRSMSPMKRSAKVVIDGFALNSAELCHLGANVQPVSLT
SYLNHRPLSPQNSPDINASMVSTPNQRSTPRIERRKARNAIIGDASKEHR
ISRDQSSCASSSTGGSIMIRSSSSMRRSAMSPASISASTSFQSLSSAGLS
VHGPEFDYEYSDKEEHRHSGFNSKTSLENVSQDLSATLSNCDILSSSSIS
IVSTNEESSDVYQSVPMTLSKVVDQLNEGVEGDERGGTLTSVKSDEYVNQ
ESSDGESSDDGDESVFLVESIQKDSKDAFGSADTENIFVIVKGHNLIEKS
DSGKVKFKLDMHYLRGLETGPKGELSVSLYFDLIRQDSKSREYKFPEEEQ
FDSFLDVVQPIYVKNHQKKLAEMKYCECLKCGMVFLNRQISEEYYECPNA
DCRSRMVIERITNEIDVPGDGDDESDGDNSVVDECDGGGYVENKDSSFDI
VVPSTKDRTTNCNGCQHTDAEKVDSSFSVVIPSHKDSKNESVSSWPPYCQ
RNLLLNKSINGMQPKMAKSLPSNVNFTELIPNTPSFEVLKTEKQQKTDVD
IFNVYIDTTDHQDKKKKVSLDQSSTTRSYSNSPAGSYTSSTTSKSRGHSR
QTSKGSIKVKTPRSSMNTPIISNQETLFENMEEFSKCNHRLKLYFDINVF
AKLDEEFLCQIRCDCVGYERGTAYDSLLIITNKTVYVFLVTDPKGDTPED
CLKKLAFCPLANLKHFQCGYFAQSFIVDSNKTGFRYKFIAGNSEKTNQFI
SHIEDIIHSHLAYTDNIPEVVREPNPQCSSNIRFQVLKANETSEAKGKRL
LRQIMDYTVPPLLKSKKMRIRTHQQCFIAKELVDWLVSRHEVDSRTEALE
LSQSFLDDGVIQIISKDQKFKDDEAIYKFTPVTTSVSTSSLDNISVDTMN
LEDGEIDANVLVYSLVKCRVLEKETKLQHSTIVLTNSHIALLKECHQWPL
SKFQPIPNQLPSQFDVKQLNKITNIVSLEFYDDEPLYARLSLVLEDTGDE
ETSWLIQSQSKEELQKLTNAICKIWEDLYAIELTVSTQQTVLPILESYIL
V
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_007045XLOC_007045Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00012559TCONS_00012559Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000591DEP_dom
IPR011991WHTH_DNA-bd_dom
IPR031782LIP1_N
IPR032675L_dom-like
IPR001611Leu-rich_rpt
Vocabulary: Biological Process
TermDefinition
GO:0035556intracellular signal transduction
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0035556 intracellular signal transduction
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000591DEP domainSMARTSM00049DEP_3coord: 1108..1181
e-value: 3.9E-18
score: 76.3
IPR000591DEP domainPFAMPF00610DEPcoord: 1113..1179
e-value: 4.0E-18
score: 65.1
IPR000591DEP domainPROSITEPS50186DEPcoord: 1113..1181
score: 14.075
IPR011991Winged helix-turn-helix DNA-binding domainGENE3D1.10.10.10coord: 1090..1323
e-value: 3.2E-22
score: 78.4
IPR011991Winged helix-turn-helix DNA-binding domainSUPERFAMILY46785"Winged helix" DNA-binding domaincoord: 1096..1180
IPR031782LKB1 serine/threonine kinase interacting protein 1, N-terminalPFAMPF15904LIP1coord: 16..103
e-value: 5.4E-11
score: 42.6
IPR032675Leucine-rich repeat domain, L domain-likeGENE3D3.80.10.10coord: 50..510
e-value: 4.9E-23
score: 80.6
IPR032675Leucine-rich repeat domain, L domain-likeSUPERFAMILY52058L domain-likecoord: 81..212
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 529..563
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 863..918
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 355..431
NoneNo IPR availableCDDcd04371DEPcoord: 1099..1178
e-value: 9.91808E-18
score: 79.3069
NoneNo IPR availableSUPERFAMILY52075Outer arm dynein light chain 1coord: 172..316
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 244..265
score: 7.789
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 120..141
score: 4.616
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 220..241
score: 5.263
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 175..196
score: 7.15
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 266..287
score: 6.403

Blast
[Close]
BLAST of TCONS_00012559-protein vs. Swiss-Prot (Human)
Match: S11IP (Serine/threonine-protein kinase 11-interacting protein OS=Homo sapiens GN=STK11IP PE=1 SV=3)

HSP 1 Score: 134.42 bits (337), Expect = 1.218e-31
Identity = 115/388 (29.64%), Postives = 188/388 (48.45%), Query Frame = 0 
Query:    3 FFRRKKKPEDVQKSQNEHLLNELCTVLKTHGEAILRGKTKLTLTTPILATLNFYFQK--ITEGVNEACFQVANNEQEKDANVLQTVLFIFDFIQKVLSLKLTSGKVATQCPLLTLEYF--KALQILEISRVNIFTIKGLHLIRRQIKSLKCFHATYAINDIVLAFGRNGEDYQTIPLLETL--DISYNQVTKLSDDAFKLLPSLINLDASFNSIENADT--QSIPAVSVINLGYNMIHNIPIFSESTYQSLTKLIIRNNNLTSLEGLENFVSLIYLDVTANCIVDFKNISQLAALEKLCVILMMENPVSYNEGYRLRVIRSMSPMKRSAKVVIDGFALNSAELCHLGANVQPVSLTSYLNHRP--LSPQNSPDINASMVSTPNQRSTP 380
            F    ++P  +  +Q + LL +L  +L+  G+ +L G + L+L TP L  LN  F+      G  +  F VA      D+ V+  + F+FD +QK LSLKL    VA   P   ++ F  K+L+ LE+  V +  + GL  I  Q+++L C  +  A+ +++ A G  G+    +P L  L  + SYN +T L D + +LL +L  L+ S N +++       +  +  +++ YN +H +P    S   +L  LI+R N L SL GLE   +L +LD+  N +   + +S L  L +L  + +  NP+ ++  +R    + +SP  R A     GF L+   L          SLT +  H    LSP   P +   + STP     P
Sbjct:    2 FGSAPQRPVAMTTAQRDSLLWKLAGLLRESGDVVLSGCSTLSLLTPTLQQLNHVFELHLGPWGPGQTGF-VALPSHPADSPVILQLQFLFDVLQKTLSLKLV--HVAGPGPTGPIKIFPFKSLRHLELRGVPLHCLHGLRGIYSQLETLICSRSLQALEELLSACG--GDFCSALPWLALLSANFSYNALTAL-DSSLRLLSALRFLNLSHNQVQDCQGFLMDLCELHHLDISYNRLHLVPRMGPSG-AALGVLILRGNELRSLHGLEQLRNLRHLDLAYNLLEGHRELSPLWLLAELRKLYLEGNPLWFHPEHRAATAQYLSPRARDAAT---GFLLDGKVL----------SLTDFQTHTSLGLSPMGPP-LPWPVGSTPETSGGP 368
The following BLAST results are available for this feature:
BLAST of TCONS_00012559-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
S11IP1.218e-3129.64Serine/threonine-protein kinase 11-interacting pro... [more]
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