TCONS_00012504-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00012504-protein
Unique NameTCONS_00012504-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length205

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00012504-protein ID=TCONS_00012504-protein|Name=TCONS_00012504-protein|organism=Clytia hemisphaerica|type=polypeptide|length=205bp
LLTKKTCNLLSQITMAYPGYGAPAPGGYPAQGYPPQQPADPLYGYFQAVA
GADGAIDAQELQRCLTSSGFSGNYQMFSMEACRLMICMLDRDYSGKMGFN
EFRELWGALNQWKNTFVAFDRDRSGTIDPNELHQAIAQWGYRLTPQALNI
IVTRYSINNQIKFDDFISAAVRLRLLTDHFRRRDTTQTGYSNFGYDDFIQ
VTMFA
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_007028XLOC_007028Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00012504TCONS_00012504Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR018247EF_Hand_1_Ca_BS
IPR011992EF-hand-dom_pair
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005509 calcium ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002048EF-hand domainSMARTSM00054efh_1coord: 111..139
e-value: 0.077
score: 22.1
coord: 81..109
e-value: 1.5
score: 16.4
IPR002048EF-hand domainPFAMPF13833EF-hand_8coord: 53..106
e-value: 3.4E-6
score: 26.6
IPR002048EF-hand domainPFAMPF13202EF-hand_5coord: 114..133
e-value: 2.1E-4
score: 20.5
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 53..71
score: 7.037
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 107..142
score: 12.393
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 77..105
score: 5.894
IPR002048EF-hand domainCDDcd00051EFhcoord: 53..106
e-value: 1.1002E-8
score: 47.9277
IPR002048EF-hand domainCDDcd00051EFhcoord: 82..137
e-value: 9.26296E-10
score: 51.0093
NoneNo IPR availableGENE3D1.10.238.10coord: 38..205
e-value: 7.3E-32
score: 109.7
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 120..132
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 40..203

Blast
[Close]
BLAST of TCONS_00012504-protein vs. Swiss-Prot (Human)
Match: SORCN (Sorcin OS=Homo sapiens GN=SRI PE=1 SV=1)

HSP 1 Score: 234.572 bits (597), Expect = 5.046e-79
Identity = 107/169 (63.31%), Postives = 126/169 (74.56%), Query Frame = 0 
Query:   35 PQQPADPLYGYFQAVAGADGAIDAQELQRCLTSSGFSGNYQMFSMEACRLMICMLDRDYSGKMGFNEFRELWGALNQWKNTFVAFDRDRSGTIDPNELHQAIAQWGYRLTPQALNIIVTRYSINNQIKFDDFISAAVRLRLLTDHFRRRDTTQTGYSNFGYDDFIQVTM 203
            P Q  DPLYGYF AVAG DG IDA ELQRCLT SG +G Y+ F++E CRLM+ MLDRD SG MGFNEF+ELW  LN W+  F++FD DRSGT+DP EL +A+   G+RL+PQA+N I  RYS N +I FDD+I+  V+LR LTD FRRRDT Q G  NF YDDFIQ  M
Sbjct:   28 PGQTQDPLYGYFAAVAGQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAVLNGWRQHFISFDTDRSGTVDPQELQKALTTMGFRLSPQAVNSIAKRYSTNGKITFDDYIACCVKLRALTDSFRRRDTAQQGVVNFPYDDFIQCVM 196
The following BLAST results are available for this feature:
BLAST of TCONS_00012504-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SORCN5.046e-7963.31Sorcin OS=Homo sapiens GN=SRI PE=1 SV=1[more]
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