TCONS_00012201-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00012201-protein
Unique Name	TCONS_00012201-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	821

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00012201-protein ID=TCONS_00012201-protein|Name=TCONS_00012201-protein|organism=Clytia hemisphaerica|type=polypeptide|length=821bp
MYQNGHTMYPQGRHANFGKWNMGDERQKTPSQPSGQPYPKFSVTEACDRI
KEEVSYLQAQTHSLKLEIEKLASDKTDMQRAYVMYYEMSYGLNVEMHKQT
EIAKRLNAICNQLLPFLSQEHQQQVMQAIDRAKQVTMSELNAIIGQQLHS
QGLPHTHPPGVSLPHPSGLPPPHLPPSSSSGLLALSNALSSAQHLPVKDE
KDRDREREREGLRESPLPPRGPTSLYARNTTDSHSSHGSDDGRGASEDYH
NRKMLGYEKRDLSNSQPNLPGLKPSNSGSNPGSNSSATNPPSVAGGTANA
TAPKKKKEDKEESDHEKSDGELVVDDTNEDRSSPANAARKRLANGEASPP
RSSSVDKKIKKEPSGRDSVDRTQHERERESREARDREPRDARERERAELE
RERGKSPVPYIGKHKPLDSKASSSPGHQSPVAKVSPIRNGPGSSYLPFMP
PHSSSAASEGRDSLHYNSRPGMPVFEGTRGMLPSFGIPSGKPAYSFHMSG
DGQLQPVPFPPDALLGPSIPRHARQLSTLNHGEVVCAVTVSNPTRHVYTG
GKGCVKVWDINQALNQSTITKPVSTLECLRDIYIRSCKLLPDGRTLIVGG
EASVVTIWDLAASTPRIKAELNSNAPACYALAISPDSKVCFSCCSDGNIA
VLDLHNQTIVQQFQGHTDGASCIDISPDGTKLWTGGLDNTVRSWDLRQGV
QLQQHNFQSQIFSLGYCPTGDWLAVGMESSHVEVLHVNKPDKYQLHLHDS
CVLSLKYATSGKWFISTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISV
DDKYIVTGSGDKKATLYEVIY

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_006864	XLOC_006864	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00012201	TCONS_00012201	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR009146	Groucho_enhance
IPR001680	WD40_repeat
IPR005617	Groucho/TLE_N
IPR011042	6-blade_b-propeller_TolB-like
IPR015943	WD40/YVTN_repeat-like_dom
IPR019775	WD40_repeat_CS
IPR017986	WD40_repeat_dom

Vocabulary: **Cellular Component**
Term	Definition
GO:0005634	nucleus

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005515	protein binding

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009146	Groucho/transducin-like enhancer	PRINTS	PR01850	GROUCHOFAMLY	coord: 782..801 score: 94.0 coord: 802..821 score: 91.5 coord: 743..761 score: 77.63 coord: 720..742 score: 81.96 coord: 762..781 score: 93.25
IPR001680	WD40 repeat	SMART	SM00320	WD40_4	coord: 778..818 e-value: 0.84 score: 17.5 coord: 738..777 e-value: 0.27 score: 20.3 coord: 614..653 e-value: 0.059 score: 22.5 coord: 569..609 e-value: 0.1 score: 21.7 coord: 656..695 e-value: 5.6E-9 score: 45.8 coord: 698..736 e-value: 89.0 score: 4.7 coord: 522..559 e-value: 0.068 score: 22.3
IPR001680	WD40 repeat	PFAM	PF00400	WD40	coord: 660..695 e-value: 0.0043 score: 17.8
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 745..776 score: 8.871
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 663..704 score: 14.819
IPR005617	Groucho/TLE, N-terminal Q-rich domain	PFAM	PF03920	TLE_N	coord: 27..151 e-value: 6.9E-62 score: 207.2
IPR011042	Six-bladed beta-propeller, TolB-like	GENE3D	2.120.10.30		coord: 698..819 e-value: 1.3E-18 score: 66.9
IPR015943	WD40/YVTN repeat-like-containing domain	GENE3D	2.130.10.10		coord: 36..697 e-value: 1.6E-48 score: 164.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 150..468
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..40
IPR019775	WD40 repeat, conserved site	PROSITE	PS00678	WD_REPEATS_1	coord: 682..696
IPR017986	WD40-repeat-containing domain	PROSITE	PS50294	WD_REPEATS_REGION	coord: 745..821 score: 9.388
IPR017986	WD40-repeat-containing domain	PROSITE	PS50294	WD_REPEATS_REGION	coord: 528..704 score: 21.015
IPR017986	WD40-repeat-containing domain	SUPERFAMILY	50978	WD40 repeat-like	coord: 498..818

Blast

[Close]

BLAST of TCONS_00012201-protein vs. Swiss-Prot (Human)
Match: TLE1 (Transducin-like enhancer protein 1 OS=Homo sapiens GN=TLE1 PE=1 SV=2)

HSP 1 Score: 811.987 bits (2096), Expect = 0.000e+0
Identity = 474/875 (54.17%), Postives = 558/875 (63.77%), Query Frame = 0

Query:    8 MYPQGRHANFGKWNMGDERQKTPSQPSGQPYPKFSVTEACDRIKEEVSYLQAQTHSLKLEIEKLASDKTDMQRAYVMYYEMSYGLNVEMHKQTEIAKRLNAICNQLLPFLSQEHQQQVMQAIDRAKQVTMSELNAIIGQQ-LHSQGLPHTHPPGVSL-PHPSGLPPPHLPPSSSSGLLALSNALSSAQHLPVKDEKDRDREREREGLRESPLPPRGPTS-LYARNTTDSHSSHGS--DDGRGASEDYHNRKMLGYEKRDLSNSQPNLPGLKPSNSGSNPGSNSSATNPPSVAGGTANATAP------KKKKEDKEESDHEKSDGE-----LVVDDTNEDRSSPANAARKRLANGEASPPRSSSVDKK--IKKEPSGRDSVDRTQHERERESREARDREPRDARERERAELERERGKSPVPYIGKHKPLDSKASSSPGHQSPVAK---VSPIRNG-----------PGSSYLPF-MPPHSS-----SAASEGRDSLHYNS----------------RPGMPVFEGTRGM-LPSF-----GIPSGKPAYSFHMSGDGQLQPVPFPPDALLGPSIPRHARQLSTLNHGEVVCAVTVSNPTRHVYTGGKGCVKVWDINQALNQSTITKPVSTLECL-RDIYIRSCKLLPDGRTLIVGGEASVVTIWDLAASTPRIKAELNSNAPACYALAISPDSKVCFSCCSDGNIAVLDLHNQTIVQQFQGHTDGASCIDISPDGTKLWTGGLDNTVRSWDLRQGVQLQQHNFQSQIFSLGYCPTGDWLAVGMESSHVEVLHVNKPDKYQLHLHDSCVLSLKYATSGKWFISTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISVDDKYIVTGSGDKKATLYEVIY 821
            M+PQ RH              TP Q +GQP+ KF++ E+ DRIKEE  +LQAQ HSLKLE EKLAS+KT+MQR YVMYYEMSYGLN+EMHKQTEIAKRLN IC Q++PFLSQEHQQQV QA++RAKQVTM+ELNAIIGQQ L +Q L H H P V L PHPS                                           GL+   +PP G ++ L A ++  S  SH +  DD +    ++H  +                           PG+++S   P S+ G       P      KK+K D ++S H  SDG+     LVVD +NED SSP  +         A  PR + +DK   +KK+         +       S  +   + ++    E+A     +  +P P      P     S++PG +  + K   + P+ N            PG    PF M PH+      ++      SLH  S                R  M  F+    M +P+      GIP GKPAYSFH++ DGQ+QPVPFPPDAL+GP IPRHARQ++TLNHGEVVCAVT+SNPTRHVYTGGKGCVKVWDI+   N+S    PVS L+CL RD YIRSCKLLPDG TLIVGGEAS ++IWDLAA TPRIKAEL S+APACYALAISPDSKVCFSCCSDGNIAV DLHNQT+V+QFQGHTDGASCIDIS DGTKLWTGGLDNTVRSWDLR+G QLQQH+F SQIFSLGYCPTG+WLAVGMESS+VEVLHVNKPDKYQLHLH+SCVLSLK+A  GKWF+STGKDNLLNAWRTPYGASIFQSKESSSVLSCDISVDDKYIVTGSGDKKAT+YEVIY
Sbjct:    1 MFPQSRHP-------------TPHQAAGQPF-KFTIPESLDRIKEEFQFLQAQYHSLKLECEKLASEKTEMQRHYVMYYEMSYGLNIEMHKQTEIAKRLNTICAQVIPFLSQEHQQQVAQAVERAKQVTMAELNAIIGQQQLQAQHLSHGHGPPVPLTPHPS-------------------------------------------GLQPPGIPPLGGSAGLLALSSALSGQSHLAIKDDKKHHDAEHHRDR--------------------------EPGTSNSLLVPDSLRGTDKRRNGPEFSNDIKKRKVDDKDSSHYDSDGDKSDDNLVVDVSNEDPSSPRASP--------AHSPRENGIDKNRLLKKD-------ASSSPASTASSASSTSLKSKEMSLHEKASTPVLKSSTPTPRSDMPTP---GTSATPGLRPGLGKPPAIDPLVNQAAAGLRTPLAVPGPYPAPFGMVPHAGMNGELTSPGAAYASLHNMSPQMSAAAAAAAVVAYGRSPMVGFDPPPHMRVPTIPPNLAGIPGGKPAYSFHVTADGQMQPVPFPPDALIGPGIPRHARQINTLNHGEVVCAVTISNPTRHVYTGGKGCVKVWDISHPGNKS----PVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISVDDKYIVTGSGDKKATVYEVIY 770

The following BLAST results are available for this feature:

BLAST of TCONS_00012201-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00012201-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
TLE1	0.000e+0	54.17	Transducin-like enhancer protein 1 OS=Homo sapiens...	[more]

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TCONS_00012201-protein (polypeptide) - C. hemisphaerica