TCONS_00012098-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00012098-protein
Unique NameTCONS_00012098-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1020

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00012098-protein ID=TCONS_00012098-protein|Name=TCONS_00012098-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1020bp
MLTSCRVFNMNHILTELDLQPDDLPYLATLIGSLELPDNLLAYLYWDLID
EDNPLKKVKENLPSDAVLPPSELRLKCVIKFIQDNRERITDIKWLSEQVF
EKSTKLSVEEGEQRLKDIIEFYKDILLASKASRIKNLTDEDELEWSPAGY
PIPSESKNKPNHLNRYKKRWHINDVSKHSKKKREPKEAGVTTIEDPEKVI
KEGTLEEAAQALEQLELKESKAEQHKDNENTESQPTIADEEKPSTTTSTE
VGVDEKSKDSKAEQEEEEEANEVESDVDDESLFVEYPREIKVTPVVADIH
EDVLSIARKRHQSGQMCQEILNLLTKGELSINMTMDDETPTARLPIPLIY
RPLRRLMYGVLFGAKLSIADDVESEEAAENKEENETEDSKVKDDVASKEN
EEETIENKTEESEETNEMPDETQQKEVDDTQKSESEAKEKEKVVQDNEPA
PKEDKEPVPKEAVGFVVKEWCVHSDKNLKSPDCVTPKALSWGVPPLKKLW
FGTDSEDNANRLKAFLSVMKSDTVNMSNTAMVPQRLMLLCCVLRYLIQQD
SKVSVLTKQDIDAFLAQALSAQLTTEHNTQSLANLKLNQVDARCIQLSSI
FMSGIENAIIANDACGSPVPWEFCCPWNFFDGKLFHTKWLQSTMNFSITD
LCEGKPHIAEKLERLRWCVTEGLDSKYSITGLEQTKKFFSPFGTPVSMHS
TPFMGNMRPPGVPPMRGGGRSRGTGGKQMVHGSGGTLHVAGVPVAHWGGN
KAGVGYSKNAPSVLVGGPNSVDLPSSHKRGRGGRGRPYGRGGRGSYHNKQ
NRQNIANNAPPPPPPPSVGRGLLETPVISPWQQGFGYEEVQNANFKRYMK
GVQKVEEVRSNISKLQHQRQVYSNRTRYQHNQQQQQQQQQQKFDTSPTPR
QPLQHNSYYSQQPVNFNSPRGPATGSSPSANGISSPSNGFHHHNNKPDTY
GFNNKNMWVGKGRGMSGGTGFSPTSPNYNASFSSARGASSSTRGHTRGGY
RSQHQQLSHGRGNWMPSNVE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_006804XLOC_006804Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00012098TCONS_00012098Clytia hemisphaericatranscript
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 855..875
NoneNo IPR availableCOILSCoilCoilcoord: 198..232
NoneNo IPR availableCOILSCoilCoilcoord: 395..418
NoneNo IPR availableGENE3D3.30.70.330coord: 366..725
e-value: 6.9E-4
score: 18.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 375..459
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 876..954
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 767..823
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 977..1020
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 219..281
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 140..200

Blast
[Close]
BLAST of TCONS_00012098-protein vs. Swiss-Prot (Human)
Match: F120C (Constitutive coactivator of PPAR-gamma-like protein 2 OS=Homo sapiens GN=FAM120C PE=1 SV=3)

HSP 1 Score: 235.728 bits (600), Expect = 5.843e-64
Identity = 137/354 (38.70%), Postives = 200/354 (56.50%), Query Frame = 0 
Query:  458 VPKEAVGFVVKEWCVHSDKNLKSPDCVTPKAL-SWGVPPLKKLWFGTDSEDNANRLKAFLSVMKSDTVNMSNTAMVPQRLMLLCCVLRYLIQQDSKVSVLTKQDIDAFLAQALSAQLTTEHNTQSLANLKLNQVDARCIQLSSIFMSGIENAIIANDACGSPVPWEFCCPWNFFDGKLFHTKWLQSTM-NFSITDLCEGKPHIAEKLERLRWCVTEGLDSKYSITGLEQTKKFFSPFGT----PVSMHSTPFMGNMRPPGVPPMRGGGRSRGTGGKQMVHGSGGTLHVAGVPVAHWGGNKAGVGYSKNAPSVL-VGGPNSVDLPSSHKRGRGGRGRPYGRGGRGSYHNKQNRQN 804
            +P E    ++KEW  +  K+ ++P+ V+      W  P LKKLW G   ED   R++AFL+ MKSDT +M N A VP  L+L+CCVLRY++Q      +L + ++D FLAQA+S QL   +    L  LK+ ++DAR IQL+++FMSG++ A+ ANDACG PVPWE CCPW +FDGKLF +K +++     S+ +LC+G+  +A K+E++R  + EG++  +           F P       PVS++S   MG+M      P+   GRSRG  G   +   GG L +AG+ V  W G+++  G       V+ VGGP           G+G      GRG +G  H K N+Q 
Sbjct:  684 LPVEVPSVILKEWSAYKGKSPQTPELVSALTFREWTCPNLKKLWLGKAVEDKNRRMRAFLACMKSDTPSMLNPANVPTHLLLMCCVLRYMVQWPGG-RILHRHELDTFLAQAVSTQL---YEPDRLQELKIEKLDARGIQLAALFMSGVDTALFANDACGQPVPWEHCCPWIYFDGKLFQSKLIKAGRERVSLVELCDGQADLATKVEKMRQSILEGVNMNHPPPSALLPSPTFVPPMVPSLYPVSLYSRA-MGSM------PLPPQGRSRGFAGLHPIPPQGGKLEIAGMVVGQWAGSRSSRGRGSFGMQVVSVGGP-----------GKGHGKEQTGRGSKG--HKKGNKQG 1013
The following BLAST results are available for this feature:
BLAST of TCONS_00012098-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
F120C5.843e-6438.70Constitutive coactivator of PPAR-gamma-like protei... [more]
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