TCONS_00012011-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00012011-protein
Unique NameTCONS_00012011-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length137

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00012011-protein ID=TCONS_00012011-protein|Name=TCONS_00012011-protein|organism=Clytia hemisphaerica|type=polypeptide|length=137bp
MGDFPKKFTSEVLRSRLTAQQFAVTQKSGTERAFTGEYWNNHKKGIYKCV
VCNEDLFTSETKFDSGSGWPSFYDVLTKGKVKLISDKSHFMIRTEVLCGM
CGAHLGHVFDDGPKPTGQRYCINSASLNFAEGQNCSL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_006745XLOC_006745Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00012011TCONS_00012011Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002579Met_Sox_Rdtase_MsrB
IPR011057Mss4-like
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0033743peptide-methionine (R)-S-oxide reductase activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
molecular_function GO:0033743 peptide-methionine (R)-S-oxide reductase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.170.150.20coord: 2..136
e-value: 6.3E-58
score: 194.2
IPR002579Peptide methionine sulphoxide reductase MrsBTIGRFAMTIGR00357TIGR00357coord: 9..134
e-value: 4.7E-59
score: 196.2
IPR002579Peptide methionine sulphoxide reductase MrsBPFAMPF01641SelRcoord: 13..130
e-value: 1.2E-54
score: 183.4
IPR002579Peptide methionine sulphoxide reductase MrsBPROSITEPS51790MSRBcoord: 10..132
score: 67.975
IPR011057Mss4-likeSUPERFAMILY51316Mss4-likecoord: 8..133

Blast
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BLAST of TCONS_00012011-protein vs. Swiss-Prot (Human)
Match: MSRB3 (Methionine-R-sulfoxide reductase B3 OS=Homo sapiens GN=MSRB3 PE=1 SV=2)

HSP 1 Score: 162.54 bits (410), Expect = 6.586e-52
Identity = 74/122 (60.66%), Postives = 89/122 (72.95%), Query Frame = 0 
Query:    8 FTSEVLRSRLTAQQFAVTQKSGTERAFTGEYWNNHKKGIYKCVVCNEDLFTSETKFDSGSGWPSFYDVLTKGKVKLISDKSHFMIRTEVLCGMCGAHLGHVFDDGPKPTGQRYCINSASLNF 129
            F+ + LR RLT  Q+ VTQ+ GTE AF GEY ++   GIYKCVVC   LF SETKFDSGSGWPSF+DV+    +    D S+ M R E  C  CGAHLGH+FDDGP+PTG+RYCINSA+L+F
Sbjct:   45 FSQQELRKRLTPLQYHVTQEKGTESAFEGEYTHHKDPGIYKCVVCGTPLFKSETKFDSGSGWPSFHDVINSEAITFTDDFSYGMHRVETSCSQCGAHLGHIFDDGPRPTGKRYCINSAALSF 166
The following BLAST results are available for this feature:
BLAST of TCONS_00012011-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MSRB36.586e-5260.66Methionine-R-sulfoxide reductase B3 OS=Homo sapien... [more]
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