TCONS_00011754-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00011754-protein
Unique NameTCONS_00011754-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length847

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00011754-protein ID=TCONS_00011754-protein|Name=TCONS_00011754-protein|organism=Clytia hemisphaerica|type=polypeptide|length=847bp
MNNGKTKTNLAVASLINSTCGSKMSIASTEVSKVQSQASSVQSATKDIPT
VANSALLYKTIPSNNSVMTPLIGAKPAVPLTINYTLQQIPSATNLSNNPL
TNIKSLTKAVTNSKESDTNILMKHESFQYQVQKPYVPILPASPFKGKPGA
NLNAKPPINSQRNNINMTNAKNPSTRNIHGKKQSQDSTAIFVPRGWNRIL
EKELITYVSPNKSRLRSMEDLIDYLQREGTCKCGLECPFKPDQVFNFNPK
VQSCFGFLPTGVDSNRETSCAVCKKFEELFPCTTKSKQTRGRKAGGKNKR
AICSERNSSPEPKKILLTGASPLEAFQTKMDAMNAASSQFMLSFQQNKDK
LLNTNNLLKNDQSEPNLGAQLSHAAEEIVKASAAMNKKPPKRRAKIDKVK
KTTPSQTQNNHMVSTAKDLIIGQLHGLIDAKSIKTDSNFTNKSLSNIQNI
PSSLIKGALLSSKTTNNFANVPFQVSQINSVPQLPSQMSSKISPSSIAVS
TSEGRGQQQMLLLQLVNQSKPQSVSTKNFPLSSSPHSILISSTSTLQTLA
LQKSQQIISSPVNIATVNSVNSLPVQYVVNPPTGYTIKQQPIIRYVSQDV
STVSILPSASKPILKQSSPVPSNYVRIAPAVATPSQTTVVEISANPLEIE
EENQKRQLHASMLQAITGKRMSSEKVYETIPAAQQFLSNIAKEEQAETLH
SSHLQNKGFEAEEMELQCEESSSSLTTEETKDGSTSRNLTSSDVNTESNL
SNQRIVWVHLPGFPNWPGKIISHLEASKPPLKNGQVYVSMFLTNQIHAVT
IDNQLFHFDKDVVQLNWESKEKQGSDLGRAVQLAIEDVSWRSSVVGE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_006602XLOC_006602Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00011754TCONS_00011754Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001739Methyl_CpG_DNA-bd
IPR000313PWWP_dom
IPR016177DNA-bd_dom
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005634 nucleus
molecular_function GO:0003677 DNA binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001739Methyl-CpG DNA bindingSMARTSM00391TAM_2coord: 185..259
e-value: 1.9E-5
score: 34.1
IPR001739Methyl-CpG DNA bindingPROSITEPS50982MBDcoord: 182..252
score: 10.667
NoneNo IPR availableGENE3D2.30.30.140coord: 744..847
e-value: 3.1E-9
score: 36.5
NoneNo IPR availableGENE3D3.30.890.10coord: 155..413
e-value: 1.3E-4
score: 21.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 287..306
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 713..746
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 384..408
NoneNo IPR availableSUPERFAMILY63748Tudor/PWWP/MBTcoord: 745..843
IPR000313PWWP domainPFAMPF00855PWWPcoord: 753..837
e-value: 1.1E-7
score: 32.2
IPR000313PWWP domainPROSITEPS50812PWWPcoord: 752..810
score: 9.017
IPR016177DNA-binding domainSUPERFAMILY54171DNA-binding domaincoord: 189..236

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00011754-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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