TCONS_00011359-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00011359-protein
Unique Name	TCONS_00011359-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	428

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00011359-protein ID=TCONS_00011359-protein|Name=TCONS_00011359-protein|organism=Clytia hemisphaerica|type=polypeptide|length=428bp
MKEEKGTVGSRQSIHHKNGGHSNGTNDEPVSFFWKSHTISVLTTLLLLLC
YLTFLEDQSEHSSEYNAKRGVLACIMVFLAFGVTQAKDGPFLRPHPVLWR
FILCCSVIYELCLIFLLFQTAKDARRWMSHFDPKLGVQLPEHDYGGSCLL
YDENNTENPWHNFWDKIDGFVPAHLFGWWIKTLILRDYWLTFLLSILFEI
LEYSLQHQLPNFSECWWDHWILDFIICNGGGILLGMFTLQHLEMKKYHWR
SLWSIPTYSGKFYRFMGQFTPYSWRKFSWCATYSLKRWLAVLGLIVMFSL
CELNVFYLKTALWIPPEHYTVLGRLLFVSFLGLVSIRECYDYLNDSACKK
FGQQSWIFCLIIITESLIAVKFLWTTVTLPPPQHIIILWTCIAIGLVLYT
CWLFVPNLFRTIRAQLSNDETNIKTKVH

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_006368	XLOC_006368	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00011359	TCONS_00011359	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR004277	PSS

Vocabulary: **Biological Process**
Term	Definition
GO:0006659	phosphatidylserine biosynthetic process

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006659	phosphatidylserine biosynthetic process

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004277	Phosphatidyl serine synthase	PFAM	PF03034	PSS	coord: 94..372 e-value: 1.1E-106 score: 356.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..23

Blast

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BLAST of TCONS_00011359-protein vs. Swiss-Prot (Human)
Match: PTSS2 (Phosphatidylserine synthase 2 OS=Homo sapiens GN=PTDSS2 PE=1 SV=1)

HSP 1 Score: 444.506 bits (1142), Expect = 5.649e-154
Identity = 216/403 (53.60%), Postives = 287/403 (71.22%), Query Frame = 0

Query:    3 EEKGTVGSRQSIHHKNGGHSNGTNDEPVSFFWKSHTISVLTTLLLLLCYLTFLEDQSEHSSEYNAKRGVLACIMVFLAFGVTQAKDGPFLRPHPVLWRFILCCSVIYELCLIFLLFQTAKDARRWMSHFDPKLGVQLPEHDYGGSCLLYDENNTENPWHNFWDKIDGFVPAHLFGWWIKTLILRDYWLTFLLSILFEILEYSLQHQLPNFSECWWDHWILDFIICNGGGILLGMFTLQHLEMKKYHWRSLWSIPTYSGKFYRFMGQFTPYSWRKFSWCATYSLKRWLAVLGLIVMFSLCELNVFYLKTALWIPPEHYTVLGRLLFVSFLGLVSIRECYDYLNDSAC-KKFGQQSWIFCLIIITESLIAVKFLWTTVTLPPPQHIIILWTCIAIGLVLYTCWLF 404
            +  G    R+S   +   + +GTN    +FFW++HT++VL  L   L Y+T LE+  + ++ YN KRG++A I+VFL FGVTQAKDGPF RPHP  WRF LC SV+YEL LIF+LFQT +D R+++ + DPKLGV LPE DYGG+CL+YD +N  +P+HN WDK+DGFVPAH  GW++KTL++RD+W+  ++S++FE LEYSL+HQLPNFSECWWDHWI+D ++CNG GI  GM TL+ L +K Y W+ LW+IPTY GK  R   QFTPYSW +F W    SL+RWLAV G+I++F L ELN FYLK  LW+PPEHY VL RL+F   +G V++RE YD+++D    KK G Q+W+   I  TE LI VK+   T+TL  P +I   WT  ++  + +T W F
Sbjct:   36 QATGPGEGRRSTESEV--YDDGTN----TFFWRAHTLTVLFILTCTLGYVTLLEETPQDTA-YNTKRGIVASILVFLCFGVTQAKDGPFSRPHPAYWRFWLCVSVVYELFLIFILFQTVQDGRQFLKYVDPKLGVPLPERDYGGNCLIYDPDNETDPFHNIWDKLDGFVPAHFLGWYLKTLMIRDWWMCMIISVMFEFLEYSLEHQLPNFSECWWDHWIMDVLVCNGLGIYCGMKTLEWLSLKTYKWQGLWNIPTYKGKMKRIAFQFTPYSWVRFEWKPASSLRRWLAVCGIILVFLLAELNTFYLKFVLWMPPEHYLVLLRLVFFVNVGGVAMREIYDFMDDPKPHKKLGPQAWLVAAITATELLIVVKYDPHTLTLSLPFYISQCWTLGSVLALTWTVWRF 431

The following BLAST results are available for this feature:

BLAST of TCONS_00011359-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00011359-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
PTSS2	5.649e-154	53.60	Phosphatidylserine synthase 2 OS=Homo sapiens GN=P...	[more]

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TCONS_00011359-protein (polypeptide) - C. hemisphaerica