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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00011349-protein ID=TCONS_00011349-protein|Name=TCONS_00011349-protein|organism=Clytia hemisphaerica|type=polypeptide|length=679bp
ANNKASGLKNDLMSCLVACLQSEKYDQLHLKVFLCFSELVHKNESCQKAL
VTSNGVPEIINIMSKKQDDMISKIGTSILQQCVKYQDDLDDCVKSGQKQV
IEKDDIQMENTNHSKLKKNVRRAKRSLPMNDICQSINDQKATNTVTNVDS
KDNTEMIDMLKSQHDLLQKFQDEIKNLRAEVRSQAASECGFDQQATMTPS
RGRTQMHYYATPSRRLYPRLCPDTAPSKRQCLDAPSASWTPQRHDMSRLT
HGSTTPSVQMLDKTPQRKYPDEGDDDVDERPALKKKTHSSTFCEEESTPS
SSFMMKQQSLFEKVQLWQKQNEHNLNAPLPQIDKDGFVMPTPMVRMIKVK
ENFMFKTPMVNGQKMQPTIQCAPKKKEATKKRCPTSSDEGFYDQNGEGDS
SGDIVSGIRRTLSFDHSRNKDEASVICHDEQKAPVTSVSNTATNINKSCV
ACRPDLSLNSKNLMQFLEQNQFTCRTHFEFLKKIQKLYDSVKRKERPAPV
LNNAITKILSQPTFPMKTPKKRLDTTNTDWENTSVFSYRSIASRRSHASE
RSDVTYRTNMMTPSRRRQRKEYTAEEVNYIIDGAERYGRRWKMVLDAYPF
QNGRTAIDLKDKYKKLKIYGTQPTPSRPVPFTTQELVNLKHGVSKFGQQW
PRILKGYNFEECRTPYDLQMKWATLMKNV Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005488 | binding |
| GO:0003677 | DNA binding |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0005488 |
binding |
| molecular_function |
GO:0003677 |
DNA binding |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | COILS | Coil | Coil | coord: 160..187 |
| None | No IPR available | GENE3D | 1.10.10.60 | | coord: 408..619
e-value: 1.1E-8
score: 34.2
coord: 624..679
e-value: 9.7E-5
score: 21.6 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 370..404 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 227..300 |
| None | No IPR available | CDD | cd11660 | SANT_TRF | coord: 629..677
e-value: 2.95567E-9
score: 52.9547 |
| IPR001005 | SANT/Myb domain | SMART | SM00717 | sant | coord: 568..619
e-value: 5.8E-7
score: 39.1
coord: 627..678
e-value: 0.11
score: 21.7 |
| IPR011989 | Armadillo-like helical | GENE3D | 1.25.10.10 | | coord: 2..252
e-value: 3.6E-6
score: 25.3 |
| IPR017930 | Myb domain | PROSITE | PS51294 | HTH_MYB | coord: 564..621
score: 9.478 |
| IPR016024 | Armadillo-type fold | SUPERFAMILY | 48371 | ARM repeat | coord: 9..94 |
| IPR009057 | Homeobox domain-like | SUPERFAMILY | 46689 | Homeodomain-like | coord: 572..624 |
Blast
The following BLAST results are available for this feature:
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