TCONS_00011240-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00011240-protein
Unique Name	TCONS_00011240-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	641

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00011240-protein ID=TCONS_00011240-protein|Name=TCONS_00011240-protein|organism=Clytia hemisphaerica|type=polypeptide|length=641bp
TTASYHVKCPKTLRSRAQDAYLLFQDLCQLTNGDNPYWLQGMKTMTRTFG
LELMESILRHYPKAFLDHPEFSFLLKERVCPLIIKLFSPNIKYKKGGQNT
PTIIEKPVFSVSVRLLRVVSVLIKQFYSLLVTECEIFLSLLVKFLDNNKP
FWQRALALEVLHNLCSQPQILRSFCQFYDMQEHSTKVFKEICEALHKFVN
SMLAREMSQVYSSASGNISPGAGPSSPISEKAPTQSGFLYRGQWIPVPNV
SQTNIKPIYLEQLEHKNEGVNVSESYAMHMVFLCVVEICQALDVLILDRI
SKKKKKDIENGDYLVENVKHTDKTGLGSEAFKHNQPLDVQDEDMTKVWNK
MIDHSWSDLLSTLSLLLETCTDEVATDHVLKGLQTFASVCGQLDRTNDRD
QFISCICKSALPVNYYANNLSVVQQKESLSKTLSSDSTTSVDKKEDQMNG
HSIVMTVKNIQCMRALLNLAHCHGGILGTAWYMTLVTLQHLTQILGLKLS
SGGTNKTAKANEIPNLVISQSMMADIPVLSTMLSQLFESSKVLDDVSLHH
LVDALCRLSTEDMEYATQNKEPCLFAVAKMLETGLVNIHRLRVLWRPLTN
HLLEVCQQPHSRLREWAGDVLTTLIKRATFYDHKPPFSEDL

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_006291	XLOC_006291	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00011240	TCONS_00011240	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR011989	ARM-like
IPR032691	Sec7_N
IPR016024	ARM-type_fold

Vocabulary: **Molecular Function**
Term	Definition
GO:0005488	binding

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005488	binding

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011989	Armadillo-like helical	GENE3D	1.25.10.10		coord: 22..324 e-value: 4.3E-9 score: 34.9
IPR011989	Armadillo-like helical	GENE3D	1.25.10.10		coord: 459..641 e-value: 0.027 score: 12.3
IPR032691	Guanine nucleotide exchange factor, N-terminal	PFAM	PF12783	Sec7_N	coord: 17..187 e-value: 1.9E-54 score: 183.7
IPR016024	Armadillo-type fold	SUPERFAMILY	48371	ARM repeat	coord: 345..417 coord: 504..632 coord: 23..213

Blast

[Close]

BLAST of TCONS_00011240-protein vs. Swiss-Prot (Human)
Match: MON2 (Protein MON2 homolog OS=Homo sapiens GN=MON2 PE=1 SV=3)

HSP 1 Score: 600.127 bits (1546), Expect = 0.000e+0
Identity = 321/655 (49.01%), Postives = 433/655 (66.11%), Query Frame = 0

Query:   12 TLRSRAQDAYLLFQDLCQLTNGDNPYWLQGMKTMTRTFGLELMESILRHYPKAFLDHPEFSFLLKERVCPLIIKLFSPNIKYKKGGQ--NTPTIIEKPVFSVSVRLLRVVSVLIKQFYSLLVTECEIFLSLLVKFLDNNKPFWQRALALEVLHNLCSQPQILRSFCQFYDMQEHSTKVFKEICEALHKFVNSM--LAREMSQVYSSASGNISPGAGPSSPISEKAPTQSG-------FLYRGQWIPVPNVS-QTNIKPIYLEQLEHKNEGVNVSESYAMHMVFLCVVEICQALDVLILDRISKKKKKDIENGDYLVENVKHTDKTGLGSEAFKHNQPLDVQDEDMTK--VWNKMIDHSWSDLLSTLSLLLETCTDEVATDHVLKGLQTFASVCGQLDRTNDRDQFISCICKSALPVNY------------YANNLSVVQQKESLSKTLSSDS---TTSVDKKEDQMNGHSIVMTVKNIQCMRALLNLAHCHGGILGTAWYMTLVTLQHLTQILGLKLSSGGTNKTAKANEIPNLVISQSMMADIPVLSTMLSQLFESSKVLDDVSLHHLVDALCRLSTEDMEYA-TQNKEPCLFAVAKMLETGLVNIHRLRVLWRPLTNHLLEVCQQPHSRLREWAGDVLTTLIKRATFYDHKPP 636
            TL+  A+DAY+LFQDLCQL N D PYWL GM  MTRTFGLEL+ES+L  +P+ FL H EFSFLLKERVCPL+IKLFSPNIK+++G    ++P  +EKP F + +RLLRVVSVLIKQFYSLLVTECEIFLSLLVKFLD +KP W RA+A+E +H  C QPQ+LRSFCQ YDM++HSTKVF++I  AL  F+ S+  +    +   S+ +GN + G   S+P +       G       F YRG WIP+  ++ Q + K  YLE L+ K E   + E YAM + F C++++ + +  +I   + + + +     +      + T++  L S +       D  D+++    VW +M++  W  LL+ LSLLL+  TDE AT+++LK   T A++CG+L     RD FI+ ICK +LP +Y             +N    VQ +  +  + SS+S     +V +        ++++T KNIQCMR LLNLAHCHG +LGT+W + L TLQHL  ILGLK SSGG  K  +A E P+ V++ ++M D+PV+S +LS+LFESS+ LDDVSLHHL++ALC LS E M+ A   NKEP LFAVAK+LETGLVN+HR+ +LWRPLT HLLEVCQ P+SR+REW  + LT+LIK    ++H PP
Sbjct:  208 TLKPCAKDAYMLFQDLCQLVNADAPYWLVGMTEMTRTFGLELLESVLNDFPQVFLQHQEFSFLLKERVCPLVIKLFSPNIKFRQGSSTSSSPAPVEKPYFPICMRLLRVVSVLIKQFYSLLVTECEIFLSLLVKFLDADKPQWLRAVAVESIHRFCVQPQLLRSFCQSYDMKQHSTKVFRDIVNALGSFIQSLFLVPPTGNPATSNQAGNNNLGGSVSAPANSGMVGIGGGVTLLPAFEYRGTWIPILTITVQGSAKATYLEMLD-KVEPPTIPEGYAMSVAFHCLLDLVRGITSMIEGELGELETECQTTTEEGSSPTQSTEQQDLQSTS-------DQMDKEIVSRAVWEEMVNACWCGLLAALSLLLDASTDEAATENILKAELTMAALCGRLGLVTSRDAFITAICKGSLPPHYALTVLNTTTAATLSNKSYSVQGQSVMMISPSSESHQQVVAVGQPLAVQPQGTVMLTSKNIQCMRTLLNLAHCHGAVLGTSWQLVLATLQHLVWILGLKPSSGGALKPGRAVEGPSTVLTTAVMTDLPVISNILSRLFESSQYLDDVSLHHLINALCSLSLEAMDMAYGNNKEPSLFAVAKLLETGLVNMHRIEILWRPLTGHLLEVCQHPNSRMREWGAEALTSLIKAGLTFNHDPP 854

The following BLAST results are available for this feature:

BLAST of TCONS_00011240-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00011240-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
MON2	0.000e+0	49.01	Protein MON2 homolog OS=Homo sapiens GN=MON2 PE=1 ...	[more]

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TCONS_00011240-protein (polypeptide) - C. hemisphaerica