TCONS_00011204-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00011204-protein
Unique NameTCONS_00011204-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length542

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00011204-protein ID=TCONS_00011204-protein|Name=TCONS_00011204-protein|organism=Clytia hemisphaerica|type=polypeptide|length=542bp
MAALIAPRPNSHPFQERQLSLKEPIKIGRAVAKAKATQNNGIFDCRVLSR
NHAMLWYENGKFFLQDTKSSNGTFVNGVRLSRGAEESEPCEIKSGDILQF
GVEVVENTKNVTHGCIIGLATLFHEDGTEATGANEEPQSVLSLASGDKPI
QPKELWQLSQFLQDALHREQMLENKLATLQRMISNSHAASDDTFQGFIQE
DKVLSRLETLENQLELVSQELPEDEPQTQLMAYQDERLEYESAAKETLQK
ILQEKIEVLQKCSDLERLLSNTEDECTFLRNTWEKSKEELGTLMERHTQL
MDELKQVKEDMTSAEQKHEATQQQTISEKKELKGQLEDAEKRGSSLAVEV
ESLQAECDFTKQQLQAMKERLETKQKEEEEETEKHDLPFASDHATLEKDV
KNKTALIRSLKEQIAEMQAKYEMEQLNKSTADDKNDDFNEHLEISCTQIK
ELEGVLQSVAVTLNTWSDGLMAGVETSTSFHYSEIQTTTNQNKEDCIVNQ
QKAIMACSEFLNNVKKHFEDVIARAPIERELSHNSTDESIKG
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_006277XLOC_006277Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00011204TCONS_00011204Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000253FHA_dom
IPR008984SMAD_FHA_domain
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 290..384
NoneNo IPR availableCOILSCoilCoilcoord: 162..182
NoneNo IPR availableCOILSCoilCoilcoord: 200..220
NoneNo IPR availableCOILSCoilCoilcoord: 255..282
NoneNo IPR availableCOILSCoilCoilcoord: 393..427
NoneNo IPR availableGENE3D2.60.200.20coord: 5..107
e-value: 4.1E-22
score: 78.4
NoneNo IPR availableGENE3D1.20.5.340coord: 246..369
e-value: 1.5E-6
score: 27.5
coord: 370..472
e-value: 0.011
score: 15.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 310..336
NoneNo IPR availableCDDcd00060FHAcoord: 5..102
e-value: 1.79525E-18
score: 80.123
IPR000253Forkhead-associated (FHA) domainSMARTSM00240FHA_2coord: 24..80
e-value: 7.9E-11
score: 52.0
IPR000253Forkhead-associated (FHA) domainPFAMPF00498FHAcoord: 25..101
e-value: 4.1E-17
score: 62.2
IPR000253Forkhead-associated (FHA) domainPROSITEPS50006FHA_DOMAINcoord: 25..80
score: 16.462
IPR008984SMAD/FHA domainSUPERFAMILY49879SMAD/FHA domaincoord: 10..105

Blast
[Close]
BLAST of TCONS_00011204-protein vs. Swiss-Prot (Human)
Match: SLMAP (Sarcolemmal membrane-associated protein OS=Homo sapiens GN=SLMAP PE=1 SV=1)

HSP 1 Score: 387.882 bits (995), Expect = 8.981e-126
Identity = 193/377 (51.19%), Postives = 275/377 (72.94%), Query Frame = 0 
Query:    3 ALIAPRPNSHPFQERQLSLKEPIKIGRAVAKAKATQNNGIFDCRVLSRNHAMLWYEN--GKFFLQDTKSSNGTFVNGVRLSRGAEESEPCEIKSGDILQFGVEVVENTKNVTHGCIIGLATLFHEDGTEATGANEE-----PQSVLSLASGDKPIQPKELWQLSQFLQDALHREQMLENKLATLQRMISNSHAASDDTFQGFIQEDKVLSRLETLENQLELVSQELPEDEPQTQLMAYQDERLEYESAAKETLQKILQEKIEVLQKCSDLERLLSNTEDECTFLRNTWEKSKEELGTLMERHTQLMDELKQVKEDMTSAEQKHEATQQQTISEKKELKGQLEDAEKRGSSLAVEVESLQAECDFTKQQLQAMKERLE 372
            A+   RPNSHPFQER + L EPIKIGR+VA+ +  QNN  FDC+VLSRNHA++W+++  GKF+LQDTKSSNGTF+N  RLSRG+EES PCEI SGDI+QFGV+V ENT+ VTHGCI+    LF  DG EA   ++      P  V  +A+    +  +EL+QLSQ+LQ+ALHREQMLE KLATLQR+++ +  ASD ++Q  I ED++LSRLE + NQL+  S+   ED  + +L+A Q+++  YE+ AKE+L+++LQEKIEV++K S++ER LSNTEDECT L+   E+++EEL  L  ++   ++E+K + + +  AE K E  QQ+  +EKKEL+ ++++ E++   L  ++E+LQA+ DFT ++L A++ RLE
Sbjct:    6 AIFTCRPNSHPFQERHVYLDEPIKIGRSVARCRPAQNNATFDCKVLSRNHALVWFDHKTGKFYLQDTKSSNGTFINSQRLSRGSEESPPCEILSGDIIQFGVDVTENTRKVTHGCIVSTIKLFLPDGMEARLRSDVIHAPLPSPVDKVAANTPSMYSQELFQLSQYLQEALHREQMLEQKLATLQRLLAITQEASDTSWQALIDEDRLLSRLEVMGNQLQACSKNQTEDSLRKELIALQEDKHNYETTAKESLRRVLQEKIEVVRKLSEVERSLSNTEDECTHLKEMNERTQEELRELANKYNGAVNEIKDLSDKLKVAEGKQEEIQQKGQAEKKELQHKIDEMEEKEQELQAKIEALQADNDFTNERLTALQVRLE 382
The following BLAST results are available for this feature:
BLAST of TCONS_00011204-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SLMAP8.981e-12651.19Sarcolemmal membrane-associated protein OS=Homo sa... [more]
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